Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Commd3Q63829 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Commd3Q63829 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Commd3Q63829 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Commd3Q63829 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Commd3Q63829 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Commd3Q63829 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Commd3Q63829 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.4■□□□□ 0.54
Commd3Q63829 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.4■□□□□ 0.54
Commd3Q63829 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.39■□□□□ 0.54
Commd3Q63829 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Commd3Q63829 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Commd3Q63829 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Commd3Q63829 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Commd3Q63829 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.39■□□□□ 0.53
Commd3Q63829 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Commd3Q63829 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Commd3Q63829 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Commd3Q63829 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Commd3Q63829 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Commd3Q63829 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Commd3Q63829 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Commd3Q63829 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Commd3Q63829 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Commd3Q63829 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Commd3Q63829 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Commd3Q63829 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.37■□□□□ 0.53
Commd3Q63829 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Commd3Q63829 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Commd3Q63829 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Commd3Q63829 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Commd3Q63829 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Commd3Q63829 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Commd3Q63829 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Commd3Q63829 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Commd3Q63829 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Commd3Q63829 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Commd3Q63829 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Commd3Q63829 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Commd3Q63829 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Commd3Q63829 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Commd3Q63829 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Commd3Q63829 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Commd3Q63829 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Commd3Q63829 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Commd3Q63829 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Commd3Q63829 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Commd3Q63829 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Commd3Q63829 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Commd3Q63829 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Commd3Q63829 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Commd3Q63829 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Commd3Q63829 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Commd3Q63829 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Commd3Q63829 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Commd3Q63829 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Commd3Q63829 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.31■□□□□ 0.52
Commd3Q63829 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.31■□□□□ 0.52
Commd3Q63829 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Commd3Q63829 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Commd3Q63829 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Commd3Q63829 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Commd3Q63829 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Commd3Q63829 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.3■□□□□ 0.52
Commd3Q63829 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Commd3Q63829 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Commd3Q63829 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Commd3Q63829 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Commd3Q63829 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.29■□□□□ 0.52
Commd3Q63829 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Commd3Q63829 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Commd3Q63829 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Commd3Q63829 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.28■□□□□ 0.52
Commd3Q63829 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Commd3Q63829 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Commd3Q63829 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Commd3Q63829 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Commd3Q63829 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Commd3Q63829 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Commd3Q63829 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Commd3Q63829 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Commd3Q63829 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Commd3Q63829 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.26■□□□□ 0.51
Commd3Q63829 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Commd3Q63829 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Commd3Q63829 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Commd3Q63829 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Commd3Q63829 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Commd3Q63829 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Commd3Q63829 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms