Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SspnQ62147 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SspnQ62147 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.34■□□□□ 0.53
SspnQ62147 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SspnQ62147 Gm45364-201ENSMUST00000210883 159 ntBASIC18.34■□□□□ 0.53
SspnQ62147 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SspnQ62147 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SspnQ62147 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.33■□□□□ 0.52
SspnQ62147 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.33■□□□□ 0.52
SspnQ62147 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.32■□□□□ 0.52
SspnQ62147 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.32■□□□□ 0.52
SspnQ62147 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
SspnQ62147 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.32■□□□□ 0.52
SspnQ62147 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SspnQ62147 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SspnQ62147 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SspnQ62147 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SspnQ62147 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SspnQ62147 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SspnQ62147 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SspnQ62147 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SspnQ62147 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SspnQ62147 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SspnQ62147 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SspnQ62147 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SspnQ62147 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SspnQ62147 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.3■□□□□ 0.52
SspnQ62147 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SspnQ62147 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SspnQ62147 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SspnQ62147 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SspnQ62147 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SspnQ62147 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.29■□□□□ 0.52
SspnQ62147 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SspnQ62147 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SspnQ62147 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SspnQ62147 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SspnQ62147 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SspnQ62147 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.28■□□□□ 0.52
SspnQ62147 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SspnQ62147 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SspnQ62147 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SspnQ62147 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.27■□□□□ 0.52
SspnQ62147 Terc-201ENSMUST00000082862 423 ntBASIC18.27■□□□□ 0.52
SspnQ62147 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SspnQ62147 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.27■□□□□ 0.51
SspnQ62147 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SspnQ62147 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.25■□□□□ 0.51
SspnQ62147 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SspnQ62147 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.25■□□□□ 0.51
SspnQ62147 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SspnQ62147 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SspnQ62147 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.24■□□□□ 0.51
SspnQ62147 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SspnQ62147 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SspnQ62147 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SspnQ62147 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SspnQ62147 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SspnQ62147 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SspnQ62147 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SspnQ62147 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SspnQ62147 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.22■□□□□ 0.51
SspnQ62147 Gm6311-201ENSMUST00000073790 878 ntBASIC18.22■□□□□ 0.51
SspnQ62147 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SspnQ62147 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SspnQ62147 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SspnQ62147 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SspnQ62147 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SspnQ62147 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.21■□□□□ 0.51
SspnQ62147 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.21■□□□□ 0.51
SspnQ62147 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SspnQ62147 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.21■□□□□ 0.51
SspnQ62147 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SspnQ62147 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SspnQ62147 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SspnQ62147 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SspnQ62147 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SspnQ62147 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 1689.6 ms