Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zic4Q61467 Gm37136-201ENSMUST00000194368 194 ntBASIC18.02■□□□□ 0.48
Zic4Q61467 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Zic4Q61467 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Zic4Q61467 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.01■□□□□ 0.47
Zic4Q61467 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Zic4Q61467 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zic4Q61467 Gm9910-201ENSMUST00000195385 1550 ntBASIC18■□□□□ 0.47
Zic4Q61467 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Zic4Q61467 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zic4Q61467 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Zic4Q61467 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zic4Q61467 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zic4Q61467 Notumos-201ENSMUST00000151998 2659 ntBASIC17.98■□□□□ 0.47
Zic4Q61467 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Zic4Q61467 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.98■□□□□ 0.47
Zic4Q61467 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zic4Q61467 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.98■□□□□ 0.47
Zic4Q61467 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.97■□□□□ 0.47
Zic4Q61467 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zic4Q61467 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.97■□□□□ 0.47
Zic4Q61467 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zic4Q61467 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.96■□□□□ 0.47
Zic4Q61467 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zic4Q61467 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zic4Q61467 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Zic4Q61467 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zic4Q61467 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.95■□□□□ 0.46
Zic4Q61467 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zic4Q61467 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zic4Q61467 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Zic4Q61467 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
Zic4Q61467 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zic4Q61467 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zic4Q61467 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zic4Q61467 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.94■□□□□ 0.46
Zic4Q61467 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Zic4Q61467 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zic4Q61467 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.93■□□□□ 0.46
Zic4Q61467 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.93■□□□□ 0.46
Zic4Q61467 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Zic4Q61467 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zic4Q61467 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zic4Q61467 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zic4Q61467 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Zic4Q61467 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.92■□□□□ 0.46
Zic4Q61467 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Zic4Q61467 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zic4Q61467 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zic4Q61467 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zic4Q61467 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zic4Q61467 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Zic4Q61467 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.91■□□□□ 0.46
Zic4Q61467 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Zic4Q61467 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zic4Q61467 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Zic4Q61467 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.9■□□□□ 0.46
Zic4Q61467 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zic4Q61467 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.9■□□□□ 0.46
Zic4Q61467 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Zic4Q61467 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zic4Q61467 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Zic4Q61467 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Zic4Q61467 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Zic4Q61467 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zic4Q61467 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zic4Q61467 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zic4Q61467 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Zic4Q61467 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.89■□□□□ 0.45
Zic4Q61467 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zic4Q61467 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zic4Q61467 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zic4Q61467 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zic4Q61467 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zic4Q61467 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zic4Q61467 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zic4Q61467 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.88■□□□□ 0.45
Zic4Q61467 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zic4Q61467 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zic4Q61467 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zic4Q61467 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms