Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ClpbQ60649 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpbQ60649 Gm27502-201ENSMUST00000183495 199 ntBASIC21.13■□□□□ 0.97
ClpbQ60649 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.13■□□□□ 0.97
ClpbQ60649 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpbQ60649 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ClpbQ60649 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClpbQ60649 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClpbQ60649 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClpbQ60649 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.12■□□□□ 0.97
ClpbQ60649 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClpbQ60649 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.12■□□□□ 0.97
ClpbQ60649 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClpbQ60649 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpbQ60649 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpbQ60649 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpbQ60649 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClpbQ60649 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ClpbQ60649 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ClpbQ60649 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClpbQ60649 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ClpbQ60649 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClpbQ60649 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ClpbQ60649 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.1■□□□□ 0.97
ClpbQ60649 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClpbQ60649 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ClpbQ60649 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClpbQ60649 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ClpbQ60649 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ClpbQ60649 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClpbQ60649 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ClpbQ60649 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ClpbQ60649 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.08■□□□□ 0.97
ClpbQ60649 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ClpbQ60649 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClpbQ60649 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClpbQ60649 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.07■□□□□ 0.96
ClpbQ60649 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.07■□□□□ 0.96
ClpbQ60649 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ClpbQ60649 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ClpbQ60649 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ClpbQ60649 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ClpbQ60649 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClpbQ60649 Gm14523-201ENSMUST00000117260 558 ntBASIC21.06■□□□□ 0.96
ClpbQ60649 Gm7332-201ENSMUST00000118351 454 ntBASIC21.06■□□□□ 0.96
ClpbQ60649 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ClpbQ60649 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClpbQ60649 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
ClpbQ60649 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ClpbQ60649 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ClpbQ60649 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.04■□□□□ 0.96
ClpbQ60649 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClpbQ60649 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ClpbQ60649 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.04■□□□□ 0.96
ClpbQ60649 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClpbQ60649 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.04■□□□□ 0.96
ClpbQ60649 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClpbQ60649 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClpbQ60649 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClpbQ60649 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClpbQ60649 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpbQ60649 Gm44428-201ENSMUST00000204474 874 ntBASIC21.02■□□□□ 0.96
ClpbQ60649 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpbQ60649 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClpbQ60649 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ClpbQ60649 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.01■□□□□ 0.95
ClpbQ60649 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpbQ60649 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpbQ60649 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpbQ60649 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClpbQ60649 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ClpbQ60649 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21■□□□□ 0.95
ClpbQ60649 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ClpbQ60649 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ClpbQ60649 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21■□□□□ 0.95
ClpbQ60649 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
ClpbQ60649 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21■□□□□ 0.95
ClpbQ60649 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21■□□□□ 0.95
ClpbQ60649 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ClpbQ60649 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ClpbQ60649 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21■□□□□ 0.95
ClpbQ60649 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ClpbQ60649 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ClpbQ60649 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClpbQ60649 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.98■□□□□ 0.95
ClpbQ60649 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ClpbQ60649 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClpbQ60649 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClpbQ60649 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClpbQ60649 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.97■□□□□ 0.95
ClpbQ60649 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ClpbQ60649 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClpbQ60649 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClpbQ60649 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ClpbQ60649 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms