Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1h4Q60641 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1h4Q60641 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h4Q60641 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1h4Q60641 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nr1h4Q60641 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nr1h4Q60641 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nr1h4Q60641 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1h4Q60641 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1h4Q60641 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1h4Q60641 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.94■□□□□ 0.94
Nr1h4Q60641 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.94■□□□□ 0.94
Nr1h4Q60641 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nr1h4Q60641 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nr1h4Q60641 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nr1h4Q60641 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.91■□□□□ 0.94
Nr1h4Q60641 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.91■□□□□ 0.94
Nr1h4Q60641 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nr1h4Q60641 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nr1h4Q60641 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nr1h4Q60641 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nr1h4Q60641 Gm6821-201ENSMUST00000107540 542 ntBASIC20.9■□□□□ 0.94
Nr1h4Q60641 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nr1h4Q60641 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nr1h4Q60641 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nr1h4Q60641 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.9■□□□□ 0.94
Nr1h4Q60641 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.89■□□□□ 0.93
Nr1h4Q60641 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Nr1h4Q60641 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.88■□□□□ 0.93
Nr1h4Q60641 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nr1h4Q60641 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.86■□□□□ 0.93
Nr1h4Q60641 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nr1h4Q60641 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nr1h4Q60641 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.86■□□□□ 0.93
Nr1h4Q60641 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Nr1h4Q60641 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nr1h4Q60641 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nr1h4Q60641 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.85■□□□□ 0.93
Nr1h4Q60641 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nr1h4Q60641 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nr1h4Q60641 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nr1h4Q60641 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.85■□□□□ 0.93
Nr1h4Q60641 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nr1h4Q60641 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nr1h4Q60641 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nr1h4Q60641 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nr1h4Q60641 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.84■□□□□ 0.93
Nr1h4Q60641 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Nr1h4Q60641 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.84■□□□□ 0.93
Nr1h4Q60641 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h4Q60641 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nr1h4Q60641 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.83■□□□□ 0.93
Nr1h4Q60641 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.83■□□□□ 0.92
Nr1h4Q60641 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h4Q60641 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h4Q60641 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nr1h4Q60641 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h4Q60641 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h4Q60641 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
Nr1h4Q60641 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h4Q60641 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms