Protein–RNA interactions for Protein: Q5RJH3

Cdh12, Cadherin-12, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh12Q5RJH3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.72■□□□□ 0.91
Cdh12Q5RJH3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh12Q5RJH3 Gm8503-201ENSMUST00000118131 455 ntBASIC20.71■□□□□ 0.91
Cdh12Q5RJH3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.71■□□□□ 0.91
Cdh12Q5RJH3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.71■□□□□ 0.91
Cdh12Q5RJH3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh12Q5RJH3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh12Q5RJH3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh12Q5RJH3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cdh12Q5RJH3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh12Q5RJH3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh12Q5RJH3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Cdh12Q5RJH3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdh12Q5RJH3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.67■□□□□ 0.9
Cdh12Q5RJH3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdh12Q5RJH3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh12Q5RJH3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
Cdh12Q5RJH3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.66■□□□□ 0.9
Cdh12Q5RJH3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh12Q5RJH3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cdh12Q5RJH3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cdh12Q5RJH3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.64■□□□□ 0.9
Cdh12Q5RJH3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh12Q5RJH3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh12Q5RJH3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh12Q5RJH3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cdh12Q5RJH3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh12Q5RJH3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh12Q5RJH3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdh12Q5RJH3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh12Q5RJH3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.59■□□□□ 0.89
Cdh12Q5RJH3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh12Q5RJH3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdh12Q5RJH3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh12Q5RJH3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.58■□□□□ 0.89
Cdh12Q5RJH3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.58■□□□□ 0.89
Cdh12Q5RJH3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh12Q5RJH3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdh12Q5RJH3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh12Q5RJH3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh12Q5RJH3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms