Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Cacna2d4Q5RJF7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.54■■□□□ 1.52
Cacna2d4Q5RJF7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.54■■□□□ 1.52
Cacna2d4Q5RJF7 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.54■■□□□ 1.52
Cacna2d4Q5RJF7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cacna2d4Q5RJF7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Cacna2d4Q5RJF7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cacna2d4Q5RJF7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cacna2d4Q5RJF7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cacna2d4Q5RJF7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cacna2d4Q5RJF7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.52■■□□□ 1.52
Cacna2d4Q5RJF7 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Cacna2d4Q5RJF7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacna2d4Q5RJF7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.49■■□□□ 1.51
Cacna2d4Q5RJF7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Cacna2d4Q5RJF7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cacna2d4Q5RJF7 Gm14523-201ENSMUST00000117260 558 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Gm12366-201ENSMUST00000121722 873 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Gm5786-201ENSMUST00000085368 882 ntBASIC24.48■■□□□ 1.51
Cacna2d4Q5RJF7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cacna2d4Q5RJF7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Cacna2d4Q5RJF7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.47■■□□□ 1.51
Cacna2d4Q5RJF7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.47■■□□□ 1.51
Cacna2d4Q5RJF7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cacna2d4Q5RJF7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cacna2d4Q5RJF7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.46■■□□□ 1.51
Cacna2d4Q5RJF7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.46■■□□□ 1.51
Cacna2d4Q5RJF7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cacna2d4Q5RJF7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.51
Cacna2d4Q5RJF7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cacna2d4Q5RJF7 Gm7332-201ENSMUST00000118351 454 ntBASIC24.45■■□□□ 1.5
Cacna2d4Q5RJF7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.45■■□□□ 1.5
Cacna2d4Q5RJF7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cacna2d4Q5RJF7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cacna2d4Q5RJF7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacna2d4Q5RJF7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacna2d4Q5RJF7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacna2d4Q5RJF7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cacna2d4Q5RJF7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna2d4Q5RJF7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna2d4Q5RJF7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacna2d4Q5RJF7 Cap2-205ENSMUST00000225824 1634 ntBASIC24.42■■□□□ 1.5
Cacna2d4Q5RJF7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Cacna2d4Q5RJF7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.41■■□□□ 1.5
Cacna2d4Q5RJF7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacna2d4Q5RJF7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna2d4Q5RJF7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Cacna2d4Q5RJF7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna2d4Q5RJF7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.4■■□□□ 1.5
Cacna2d4Q5RJF7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacna2d4Q5RJF7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cacna2d4Q5RJF7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cacna2d4Q5RJF7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cacna2d4Q5RJF7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cacna2d4Q5RJF7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cacna2d4Q5RJF7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Cacna2d4Q5RJF7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cacna2d4Q5RJF7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cacna2d4Q5RJF7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.37■■□□□ 1.49
Cacna2d4Q5RJF7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cacna2d4Q5RJF7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 216.2 ms