Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rnf43Q5NCP0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf43Q5NCP0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf43Q5NCP0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rnf43Q5NCP0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rnf43Q5NCP0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf43Q5NCP0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf43Q5NCP0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf43Q5NCP0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Gm10232-201ENSMUST00000089221 720 ntBASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf43Q5NCP0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf43Q5NCP0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.62■■□□□ 1.21
Rnf43Q5NCP0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf43Q5NCP0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Rnf43Q5NCP0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Rnf43Q5NCP0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf43Q5NCP0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf43Q5NCP0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf43Q5NCP0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.6■■□□□ 1.21
Rnf43Q5NCP0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rnf43Q5NCP0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.59■■□□□ 1.21
Rnf43Q5NCP0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf43Q5NCP0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf43Q5NCP0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf43Q5NCP0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.58■■□□□ 1.21
Rnf43Q5NCP0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf43Q5NCP0 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.58■■□□□ 1.2
Rnf43Q5NCP0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf43Q5NCP0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf43Q5NCP0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf43Q5NCP0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.57■■□□□ 1.2
Rnf43Q5NCP0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rnf43Q5NCP0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf43Q5NCP0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf43Q5NCP0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf43Q5NCP0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf43Q5NCP0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf43Q5NCP0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rnf43Q5NCP0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf43Q5NCP0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Etf1-202ENSMUST00000180351 108 ntBASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf43Q5NCP0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Rnf43Q5NCP0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf43Q5NCP0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf43Q5NCP0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf43Q5NCP0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.51■■□□□ 1.19
Rnf43Q5NCP0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf43Q5NCP0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf43Q5NCP0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf43Q5NCP0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.51■■□□□ 1.19
Rnf43Q5NCP0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf43Q5NCP0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.49■■□□□ 1.19
Rnf43Q5NCP0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf43Q5NCP0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rnf43Q5NCP0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf43Q5NCP0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf43Q5NCP0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf43Q5NCP0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf43Q5NCP0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms