Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.33■■□□□ 1
Prune2Q52KR3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.32■■□□□ 1
Prune2Q52KR3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prune2Q52KR3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Prune2Q52KR3 Gm7417-201ENSMUST00000192950 473 ntBASIC21.32■■□□□ 1
Prune2Q52KR3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.31■■□□□ 1
Prune2Q52KR3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.31■■□□□ 1
Prune2Q52KR3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Prune2Q52KR3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Prune2Q52KR3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.31■■□□□ 1
Prune2Q52KR3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.3■■□□□ 1
Prune2Q52KR3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.3■■□□□ 1
Prune2Q52KR3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prune2Q52KR3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prune2Q52KR3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prune2Q52KR3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.29■■□□□ 1
Prune2Q52KR3 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.28■■□□□ 1
Prune2Q52KR3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Prune2Q52KR3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prune2Q52KR3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.27■■□□□ 1
Prune2Q52KR3 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.27■■□□□ 1
Prune2Q52KR3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Prune2Q52KR3 Zxda-201ENSMUST00000117281 2621 ntBASIC21.27■■□□□ 1
Prune2Q52KR3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prune2Q52KR3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prune2Q52KR3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prune2Q52KR3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.27■□□□□ 0.99
Prune2Q52KR3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prune2Q52KR3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Prune2Q52KR3 Amer2-203ENSMUST00000225247 2662 ntBASIC21.25■□□□□ 0.99
Prune2Q52KR3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prune2Q52KR3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prune2Q52KR3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prune2Q52KR3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Prune2Q52KR3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.24■□□□□ 0.99
Prune2Q52KR3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prune2Q52KR3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prune2Q52KR3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prune2Q52KR3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prune2Q52KR3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prune2Q52KR3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prune2Q52KR3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prune2Q52KR3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.22■□□□□ 0.99
Prune2Q52KR3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prune2Q52KR3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.22■□□□□ 0.99
Prune2Q52KR3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prune2Q52KR3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prune2Q52KR3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prune2Q52KR3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.21■□□□□ 0.99
Prune2Q52KR3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.21■□□□□ 0.99
Prune2Q52KR3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.21■□□□□ 0.99
Prune2Q52KR3 Gm12821-201ENSMUST00000120022 600 ntBASIC21.2■□□□□ 0.98
Prune2Q52KR3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.2■□□□□ 0.98
Prune2Q52KR3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prune2Q52KR3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Prune2Q52KR3 Gm29257-201ENSMUST00000186115 639 ntBASIC21.2■□□□□ 0.98
Prune2Q52KR3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prune2Q52KR3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prune2Q52KR3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prune2Q52KR3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prune2Q52KR3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prune2Q52KR3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Prune2Q52KR3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.18■□□□□ 0.98
Prune2Q52KR3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prune2Q52KR3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.18■□□□□ 0.98
Prune2Q52KR3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prune2Q52KR3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prune2Q52KR3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Prune2Q52KR3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.17■□□□□ 0.98
Prune2Q52KR3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Gm8495-201ENSMUST00000188740 694 ntBASIC21.16■□□□□ 0.98
Prune2Q52KR3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.16■□□□□ 0.98
Prune2Q52KR3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prune2Q52KR3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Prune2Q52KR3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.14■□□□□ 0.98
Prune2Q52KR3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.14■□□□□ 0.98
Prune2Q52KR3 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.14■□□□□ 0.98
Prune2Q52KR3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Prune2Q52KR3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prune2Q52KR3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.13■□□□□ 0.97
Prune2Q52KR3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prune2Q52KR3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prune2Q52KR3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Prune2Q52KR3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.12■□□□□ 0.97
Prune2Q52KR3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms