Protein–RNA interactions for Protein: Q4KL78

Khdc1c, KH homology domain-containing protein 1C, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1cQ4KL78 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Gm45855-201ENSMUST00000212546 880 ntBASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc1cQ4KL78 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Khdc1cQ4KL78 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc1cQ4KL78 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc1cQ4KL78 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Khdc1cQ4KL78 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc1cQ4KL78 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Khdc1cQ4KL78 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Khdc1cQ4KL78 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc1cQ4KL78 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc1cQ4KL78 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.29■□□□□ 0.2
Khdc1cQ4KL78 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc1cQ4KL78 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc1cQ4KL78 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Khdc1cQ4KL78 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Khdc1cQ4KL78 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc1cQ4KL78 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.28■□□□□ 0.2
Khdc1cQ4KL78 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc1cQ4KL78 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.27■□□□□ 0.2
Khdc1cQ4KL78 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Khdc1cQ4KL78 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.27■□□□□ 0.19
Khdc1cQ4KL78 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc1cQ4KL78 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc1cQ4KL78 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Khdc1cQ4KL78 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc1cQ4KL78 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc1cQ4KL78 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc1cQ4KL78 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc1cQ4KL78 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Khdc1cQ4KL78 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc1cQ4KL78 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Khdc1cQ4KL78 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc1cQ4KL78 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc1cQ4KL78 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc1cQ4KL78 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc1cQ4KL78 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.2■□□□□ 0.18
Khdc1cQ4KL78 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc1cQ4KL78 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc1cQ4KL78 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms