Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Gm7332-201ENSMUST00000118351 454 ntBASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lsmem1Q3UQS2 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.59■■□□□ 1.21
Lsmem1Q3UQS2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lsmem1Q3UQS2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lsmem1Q3UQS2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lsmem1Q3UQS2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lsmem1Q3UQS2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.58■■□□□ 1.21
Lsmem1Q3UQS2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.58■■□□□ 1.21
Lsmem1Q3UQS2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lsmem1Q3UQS2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Lsmem1Q3UQS2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Cap2-205ENSMUST00000225824 1634 ntBASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.57■■□□□ 1.2
Lsmem1Q3UQS2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Lsmem1Q3UQS2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lsmem1Q3UQS2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lsmem1Q3UQS2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lsmem1Q3UQS2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.56■■□□□ 1.2
Lsmem1Q3UQS2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.55■■□□□ 1.2
Lsmem1Q3UQS2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lsmem1Q3UQS2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lsmem1Q3UQS2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lsmem1Q3UQS2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.55■■□□□ 1.2
Lsmem1Q3UQS2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.54■■□□□ 1.2
Lsmem1Q3UQS2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lsmem1Q3UQS2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.54■■□□□ 1.2
Lsmem1Q3UQS2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lsmem1Q3UQS2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lsmem1Q3UQS2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.52■■□□□ 1.2
Lsmem1Q3UQS2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lsmem1Q3UQS2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lsmem1Q3UQS2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lsmem1Q3UQS2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lsmem1Q3UQS2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.51■■□□□ 1.19
Lsmem1Q3UQS2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lsmem1Q3UQS2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Lsmem1Q3UQS2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lsmem1Q3UQS2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lsmem1Q3UQS2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lsmem1Q3UQS2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lsmem1Q3UQS2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lsmem1Q3UQS2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.49■■□□□ 1.19
Lsmem1Q3UQS2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lsmem1Q3UQS2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Lsmem1Q3UQS2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Lsmem1Q3UQS2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lsmem1Q3UQS2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lsmem1Q3UQS2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Lsmem1Q3UQS2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lsmem1Q3UQS2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lsmem1Q3UQS2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lsmem1Q3UQS2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lsmem1Q3UQS2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Lsmem1Q3UQS2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lsmem1Q3UQS2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.44■■□□□ 1.18
Lsmem1Q3UQS2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lsmem1Q3UQS2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lsmem1Q3UQS2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lsmem1Q3UQS2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.42■■□□□ 1.18
Lsmem1Q3UQS2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lsmem1Q3UQS2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lsmem1Q3UQS2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lsmem1Q3UQS2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lsmem1Q3UQS2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms