Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.73■■□□□ 1.39
Smcr8Q3UMB5 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.73■■□□□ 1.39
Smcr8Q3UMB5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smcr8Q3UMB5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smcr8Q3UMB5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smcr8Q3UMB5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.72■■□□□ 1.39
Smcr8Q3UMB5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smcr8Q3UMB5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Smcr8Q3UMB5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smcr8Q3UMB5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Smcr8Q3UMB5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smcr8Q3UMB5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Smcr8Q3UMB5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.68■■□□□ 1.38
Smcr8Q3UMB5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smcr8Q3UMB5 Gm15546-201ENSMUST00000122095 826 ntBASIC23.68■■□□□ 1.38
Smcr8Q3UMB5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smcr8Q3UMB5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smcr8Q3UMB5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smcr8Q3UMB5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Smcr8Q3UMB5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Gm13238-201ENSMUST00000117655 780 ntBASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.66■■□□□ 1.38
Smcr8Q3UMB5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smcr8Q3UMB5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smcr8Q3UMB5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.65■■□□□ 1.38
Smcr8Q3UMB5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smcr8Q3UMB5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smcr8Q3UMB5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smcr8Q3UMB5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 Gm45444-201ENSMUST00000211394 898 ntBASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.63■■□□□ 1.37
Smcr8Q3UMB5 Gm43566-201ENSMUST00000196851 808 ntBASIC23.62■■□□□ 1.37
Smcr8Q3UMB5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Smcr8Q3UMB5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Smcr8Q3UMB5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smcr8Q3UMB5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smcr8Q3UMB5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Smcr8Q3UMB5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smcr8Q3UMB5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smcr8Q3UMB5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Smcr8Q3UMB5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smcr8Q3UMB5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.58■■□□□ 1.37
Smcr8Q3UMB5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smcr8Q3UMB5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.58■■□□□ 1.36
Smcr8Q3UMB5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Smcr8Q3UMB5 Gm15820-201ENSMUST00000201566 728 ntBASIC23.57■■□□□ 1.36
Smcr8Q3UMB5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smcr8Q3UMB5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smcr8Q3UMB5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smcr8Q3UMB5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Smcr8Q3UMB5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smcr8Q3UMB5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Smcr8Q3UMB5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.56■■□□□ 1.36
Smcr8Q3UMB5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Smcr8Q3UMB5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Smcr8Q3UMB5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.55■■□□□ 1.36
Smcr8Q3UMB5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms