Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Uspl1Q3ULM6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Cap2-205ENSMUST00000225824 1634 ntBASIC28.98■■■□□ 2.23
Uspl1Q3ULM6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.97■■■□□ 2.23
Uspl1Q3ULM6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Uspl1Q3ULM6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28.96■■■□□ 2.23
Uspl1Q3ULM6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Uspl1Q3ULM6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Uspl1Q3ULM6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.95■■■□□ 2.23
Uspl1Q3ULM6 Gm7332-201ENSMUST00000118351 454 ntBASIC28.95■■■□□ 2.22
Uspl1Q3ULM6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Uspl1Q3ULM6 Gm28731-201ENSMUST00000185564 1569 ntBASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Uspl1Q3ULM6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
Uspl1Q3ULM6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Uspl1Q3ULM6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Uspl1Q3ULM6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.91■■■□□ 2.22
Uspl1Q3ULM6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
Uspl1Q3ULM6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC28.9■■■□□ 2.22
Uspl1Q3ULM6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.9■■■□□ 2.22
Uspl1Q3ULM6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Uspl1Q3ULM6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Uspl1Q3ULM6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Uspl1Q3ULM6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Uspl1Q3ULM6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.88■■■□□ 2.21
Uspl1Q3ULM6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Uspl1Q3ULM6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Uspl1Q3ULM6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Uspl1Q3ULM6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
Uspl1Q3ULM6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Uspl1Q3ULM6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Uspl1Q3ULM6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Uspl1Q3ULM6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Uspl1Q3ULM6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Uspl1Q3ULM6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Uspl1Q3ULM6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC28.84■■■□□ 2.21
Uspl1Q3ULM6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Uspl1Q3ULM6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Uspl1Q3ULM6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Uspl1Q3ULM6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
Uspl1Q3ULM6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.82■■■□□ 2.2
Uspl1Q3ULM6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC28.81■■■□□ 2.2
Uspl1Q3ULM6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Uspl1Q3ULM6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Uspl1Q3ULM6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Uspl1Q3ULM6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Uspl1Q3ULM6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Uspl1Q3ULM6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Uspl1Q3ULM6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Uspl1Q3ULM6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Uspl1Q3ULM6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Uspl1Q3ULM6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Uspl1Q3ULM6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Uspl1Q3ULM6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.77■■■□□ 2.2
Uspl1Q3ULM6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Uspl1Q3ULM6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Uspl1Q3ULM6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Uspl1Q3ULM6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Uspl1Q3ULM6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Uspl1Q3ULM6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Uspl1Q3ULM6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Uspl1Q3ULM6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
Uspl1Q3ULM6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Uspl1Q3ULM6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Uspl1Q3ULM6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Uspl1Q3ULM6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Uspl1Q3ULM6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Uspl1Q3ULM6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms