Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Lins1Q3U1D0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Lins1Q3U1D0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Lins1Q3U1D0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Lins1Q3U1D0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.5■■□□□ 1.83
Lins1Q3U1D0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Lins1Q3U1D0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Lins1Q3U1D0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.49■■□□□ 1.83
Lins1Q3U1D0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lins1Q3U1D0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lins1Q3U1D0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Lins1Q3U1D0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lins1Q3U1D0 Gm22567-201ENSMUST00000175542 342 ntBASIC26.48■■□□□ 1.83
Lins1Q3U1D0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lins1Q3U1D0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lins1Q3U1D0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Lins1Q3U1D0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Lins1Q3U1D0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.47■■□□□ 1.83
Lins1Q3U1D0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Lins1Q3U1D0 Gm45444-201ENSMUST00000211394 898 ntBASIC26.46■■□□□ 1.83
Lins1Q3U1D0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.46■■□□□ 1.83
Lins1Q3U1D0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Lins1Q3U1D0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Lins1Q3U1D0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Lins1Q3U1D0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Lins1Q3U1D0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.45■■□□□ 1.82
Lins1Q3U1D0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Lins1Q3U1D0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.44■■□□□ 1.82
Lins1Q3U1D0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Lins1Q3U1D0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.44■■□□□ 1.82
Lins1Q3U1D0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lins1Q3U1D0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lins1Q3U1D0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lins1Q3U1D0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.42■■□□□ 1.82
Lins1Q3U1D0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lins1Q3U1D0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lins1Q3U1D0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Lins1Q3U1D0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Lins1Q3U1D0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.41■■□□□ 1.82
Lins1Q3U1D0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lins1Q3U1D0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lins1Q3U1D0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Lins1Q3U1D0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lins1Q3U1D0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lins1Q3U1D0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lins1Q3U1D0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Lins1Q3U1D0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
Lins1Q3U1D0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lins1Q3U1D0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.37■■□□□ 1.81
Lins1Q3U1D0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Lins1Q3U1D0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lins1Q3U1D0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Lins1Q3U1D0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.37■■□□□ 1.81
Lins1Q3U1D0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Lins1Q3U1D0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lins1Q3U1D0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lins1Q3U1D0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lins1Q3U1D0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lins1Q3U1D0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lins1Q3U1D0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Lins1Q3U1D0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.34■■□□□ 1.81
Lins1Q3U1D0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lins1Q3U1D0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.34■■□□□ 1.81
Lins1Q3U1D0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lins1Q3U1D0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lins1Q3U1D0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Lins1Q3U1D0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lins1Q3U1D0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lins1Q3U1D0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Gm15820-201ENSMUST00000201566 728 ntBASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.31■■□□□ 1.8
Lins1Q3U1D0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms