Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smim6Q3U0I6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.27■□□□□ 0.36
Smim6Q3U0I6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Smim6Q3U0I6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim6Q3U0I6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim6Q3U0I6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smim6Q3U0I6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smim6Q3U0I6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim6Q3U0I6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim6Q3U0I6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.24■□□□□ 0.35
Smim6Q3U0I6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smim6Q3U0I6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smim6Q3U0I6 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.24■□□□□ 0.35
Smim6Q3U0I6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim6Q3U0I6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim6Q3U0I6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim6Q3U0I6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smim6Q3U0I6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim6Q3U0I6 Gm22567-201ENSMUST00000175542 342 ntBASIC17.23■□□□□ 0.35
Smim6Q3U0I6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim6Q3U0I6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim6Q3U0I6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim6Q3U0I6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Smim6Q3U0I6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.19■□□□□ 0.34
Smim6Q3U0I6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim6Q3U0I6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim6Q3U0I6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim6Q3U0I6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Smim6Q3U0I6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim6Q3U0I6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim6Q3U0I6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim6Q3U0I6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim6Q3U0I6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smim6Q3U0I6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim6Q3U0I6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim6Q3U0I6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim6Q3U0I6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim6Q3U0I6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.14■□□□□ 0.33
Smim6Q3U0I6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim6Q3U0I6 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.14■□□□□ 0.33
Smim6Q3U0I6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim6Q3U0I6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smim6Q3U0I6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim6Q3U0I6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim6Q3U0I6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smim6Q3U0I6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim6Q3U0I6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim6Q3U0I6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms