Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem88bQ3TYP4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmem88bQ3TYP4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmem88bQ3TYP4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
Tmem88bQ3TYP4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.42■□□□□ 0.54
Tmem88bQ3TYP4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmem88bQ3TYP4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem88bQ3TYP4 Amer2-203ENSMUST00000225247 2662 ntBASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem88bQ3TYP4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmem88bQ3TYP4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem88bQ3TYP4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem88bQ3TYP4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.39■□□□□ 0.53
Tmem88bQ3TYP4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Tmem88bQ3TYP4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem88bQ3TYP4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem88bQ3TYP4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem88bQ3TYP4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem88bQ3TYP4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem88bQ3TYP4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem88bQ3TYP4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem88bQ3TYP4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem88bQ3TYP4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.35■□□□□ 0.53
Tmem88bQ3TYP4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tmem88bQ3TYP4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.35■□□□□ 0.53
Tmem88bQ3TYP4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.34■□□□□ 0.53
Tmem88bQ3TYP4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.33■□□□□ 0.53
Tmem88bQ3TYP4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tmem88bQ3TYP4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem88bQ3TYP4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tmem88bQ3TYP4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.32■□□□□ 0.52
Tmem88bQ3TYP4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem88bQ3TYP4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem88bQ3TYP4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem88bQ3TYP4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem88bQ3TYP4 Gm7417-201ENSMUST00000192950 473 ntBASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem88bQ3TYP4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Gm13241-201ENSMUST00000094493 780 ntBASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem88bQ3TYP4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tmem88bQ3TYP4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tmem88bQ3TYP4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem88bQ3TYP4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem88bQ3TYP4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms