Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Thbs3Q05895 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Thbs3Q05895 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Thbs3Q05895 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thbs3Q05895 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.39■□□□□ 0.69
Thbs3Q05895 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thbs3Q05895 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.39■□□□□ 0.69
Thbs3Q05895 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thbs3Q05895 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs3Q05895 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Thbs3Q05895 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Thbs3Q05895 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.38■□□□□ 0.69
Thbs3Q05895 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.38■□□□□ 0.69
Thbs3Q05895 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs3Q05895 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs3Q05895 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs3Q05895 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.37■□□□□ 0.69
Thbs3Q05895 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs3Q05895 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs3Q05895 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.36■□□□□ 0.69
Thbs3Q05895 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs3Q05895 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs3Q05895 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs3Q05895 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs3Q05895 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs3Q05895 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs3Q05895 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.35■□□□□ 0.69
Thbs3Q05895 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Thbs3Q05895 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs3Q05895 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.34■□□□□ 0.69
Thbs3Q05895 Gm27502-201ENSMUST00000183495 199 ntBASIC19.34■□□□□ 0.69
Thbs3Q05895 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs3Q05895 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs3Q05895 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs3Q05895 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Thbs3Q05895 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Thbs3Q05895 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thbs3Q05895 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Thbs3Q05895 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.32■□□□□ 0.68
Thbs3Q05895 Gm14523-201ENSMUST00000117260 558 ntBASIC19.32■□□□□ 0.68
Thbs3Q05895 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Thbs3Q05895 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Thbs3Q05895 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.32■□□□□ 0.68
Thbs3Q05895 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Thbs3Q05895 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Thbs3Q05895 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.31■□□□□ 0.68
Thbs3Q05895 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.31■□□□□ 0.68
Thbs3Q05895 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.31■□□□□ 0.68
Thbs3Q05895 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs3Q05895 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs3Q05895 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Thbs3Q05895 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs3Q05895 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs3Q05895 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Thbs3Q05895 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Thbs3Q05895 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs3Q05895 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.29■□□□□ 0.68
Thbs3Q05895 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Thbs3Q05895 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs3Q05895 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs3Q05895 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs3Q05895 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thbs3Q05895 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Gm7332-201ENSMUST00000118351 454 ntBASIC19.28■□□□□ 0.68
Thbs3Q05895 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
Thbs3Q05895 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thbs3Q05895 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Thbs3Q05895 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.27■□□□□ 0.68
Thbs3Q05895 Gm12366-201ENSMUST00000121722 873 ntBASIC19.27■□□□□ 0.68
Thbs3Q05895 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.27■□□□□ 0.68
Thbs3Q05895 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.27■□□□□ 0.68
Thbs3Q05895 Gm5786-201ENSMUST00000085368 882 ntBASIC19.27■□□□□ 0.68
Thbs3Q05895 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thbs3Q05895 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs3Q05895 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs3Q05895 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.26■□□□□ 0.67
Thbs3Q05895 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.26■□□□□ 0.67
Thbs3Q05895 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.26■□□□□ 0.67
Thbs3Q05895 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs3Q05895 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thbs3Q05895 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Thbs3Q05895 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Thbs3Q05895 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Thbs3Q05895 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thbs3Q05895 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms