Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.88■□□□□ 0.77
Shc1P98083 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.88■□□□□ 0.77
Shc1P98083 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.88■□□□□ 0.77
Shc1P98083 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.87■□□□□ 0.77
Shc1P98083 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shc1P98083 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shc1P98083 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shc1P98083 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.86■□□□□ 0.77
Shc1P98083 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.86■□□□□ 0.77
Shc1P98083 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Shc1P98083 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shc1P98083 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shc1P98083 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shc1P98083 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Shc1P98083 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shc1P98083 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Shc1P98083 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Shc1P98083 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shc1P98083 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.84■□□□□ 0.77
Shc1P98083 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shc1P98083 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.84■□□□□ 0.77
Shc1P98083 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shc1P98083 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shc1P98083 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shc1P98083 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Shc1P98083 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.83■□□□□ 0.77
Shc1P98083 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shc1P98083 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shc1P98083 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shc1P98083 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shc1P98083 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shc1P98083 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shc1P98083 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shc1P98083 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Shc1P98083 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.81■□□□□ 0.76
Shc1P98083 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.81■□□□□ 0.76
Shc1P98083 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shc1P98083 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shc1P98083 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shc1P98083 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Shc1P98083 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shc1P98083 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shc1P98083 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shc1P98083 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shc1P98083 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shc1P98083 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shc1P98083 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shc1P98083 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shc1P98083 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shc1P98083 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shc1P98083 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shc1P98083 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Shc1P98083 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Shc1P98083 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shc1P98083 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shc1P98083 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shc1P98083 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.76■□□□□ 0.75
Shc1P98083 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shc1P98083 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shc1P98083 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shc1P98083 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Shc1P98083 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shc1P98083 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shc1P98083 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shc1P98083 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.74■□□□□ 0.75
Shc1P98083 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shc1P98083 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shc1P98083 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shc1P98083 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shc1P98083 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shc1P98083 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.73■□□□□ 0.75
Shc1P98083 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shc1P98083 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.73■□□□□ 0.75
Shc1P98083 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shc1P98083 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.73■□□□□ 0.75
Shc1P98083 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Shc1P98083 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shc1P98083 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.72■□□□□ 0.75
Shc1P98083 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Shc1P98083 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.71■□□□□ 0.75
Shc1P98083 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shc1P98083 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shc1P98083 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms