Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.69■□□□□ 0.74
SgcbP82349 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SgcbP82349 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SgcbP82349 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SgcbP82349 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.67■□□□□ 0.74
SgcbP82349 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SgcbP82349 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.67■□□□□ 0.74
SgcbP82349 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcbP82349 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcbP82349 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SgcbP82349 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SgcbP82349 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SgcbP82349 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SgcbP82349 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SgcbP82349 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SgcbP82349 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SgcbP82349 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SgcbP82349 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SgcbP82349 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SgcbP82349 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.64■□□□□ 0.73
SgcbP82349 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SgcbP82349 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.63■□□□□ 0.73
SgcbP82349 Gm10420-201ENSMUST00000121713 882 ntBASIC19.63■□□□□ 0.73
SgcbP82349 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.63■□□□□ 0.73
SgcbP82349 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcbP82349 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcbP82349 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SgcbP82349 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SgcbP82349 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcbP82349 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.61■□□□□ 0.73
SgcbP82349 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcbP82349 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcbP82349 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcbP82349 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SgcbP82349 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcbP82349 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcbP82349 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcbP82349 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcbP82349 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SgcbP82349 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SgcbP82349 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SgcbP82349 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcbP82349 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
SgcbP82349 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcbP82349 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcbP82349 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SgcbP82349 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.58■□□□□ 0.72
SgcbP82349 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SgcbP82349 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SgcbP82349 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SgcbP82349 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SgcbP82349 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcbP82349 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SgcbP82349 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcbP82349 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcbP82349 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcbP82349 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SgcbP82349 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcbP82349 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcbP82349 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.55■□□□□ 0.72
SgcbP82349 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcbP82349 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SgcbP82349 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.54■□□□□ 0.72
SgcbP82349 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SgcbP82349 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.54■□□□□ 0.72
SgcbP82349 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SgcbP82349 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.54■□□□□ 0.72
SgcbP82349 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.54■□□□□ 0.72
SgcbP82349 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcbP82349 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcbP82349 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SgcbP82349 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcbP82349 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.53■□□□□ 0.72
SgcbP82349 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SgcbP82349 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SgcbP82349 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SgcbP82349 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms