Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim4P70271 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim4P70271 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pdlim4P70271 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim4P70271 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim4P70271 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim4P70271 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim4P70271 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim4P70271 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pdlim4P70271 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim4P70271 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim4P70271 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pdlim4P70271 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim4P70271 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim4P70271 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim4P70271 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim4P70271 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim4P70271 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.23■□□□□ 0.51
Pdlim4P70271 Gm27502-201ENSMUST00000183495 199 ntBASIC18.23■□□□□ 0.51
Pdlim4P70271 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim4P70271 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.22■□□□□ 0.51
Pdlim4P70271 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.22■□□□□ 0.51
Pdlim4P70271 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim4P70271 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim4P70271 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pdlim4P70271 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim4P70271 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim4P70271 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim4P70271 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim4P70271 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim4P70271 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.2■□□□□ 0.5
Pdlim4P70271 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim4P70271 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim4P70271 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim4P70271 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.19■□□□□ 0.5
Pdlim4P70271 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.19■□□□□ 0.5
Pdlim4P70271 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim4P70271 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim4P70271 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim4P70271 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim4P70271 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim4P70271 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim4P70271 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim4P70271 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim4P70271 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim4P70271 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim4P70271 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.17■□□□□ 0.5
Pdlim4P70271 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.17■□□□□ 0.5
Pdlim4P70271 Gm12366-201ENSMUST00000121722 873 ntBASIC18.17■□□□□ 0.5
Pdlim4P70271 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim4P70271 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim4P70271 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim4P70271 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pdlim4P70271 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.17■□□□□ 0.5
Pdlim4P70271 Gm5786-201ENSMUST00000085368 882 ntBASIC18.17■□□□□ 0.5
Pdlim4P70271 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim4P70271 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim4P70271 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim4P70271 Gm14523-201ENSMUST00000117260 558 ntBASIC18.16■□□□□ 0.5
Pdlim4P70271 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim4P70271 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.16■□□□□ 0.5
Pdlim4P70271 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim4P70271 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim4P70271 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim4P70271 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.15■□□□□ 0.5
Pdlim4P70271 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim4P70271 Cap2-205ENSMUST00000225824 1634 ntBASIC18.15■□□□□ 0.5
Pdlim4P70271 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pdlim4P70271 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pdlim4P70271 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim4P70271 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Pdlim4P70271 Gm7332-201ENSMUST00000118351 454 ntBASIC18.14■□□□□ 0.49
Pdlim4P70271 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdlim4P70271 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim4P70271 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim4P70271 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.14■□□□□ 0.49
Pdlim4P70271 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim4P70271 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim4P70271 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim4P70271 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pdlim4P70271 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms