Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm6P62313 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm6P62313 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm6P62313 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.37■□□□□ 0.69
Lsm6P62313 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm6P62313 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm6P62313 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lsm6P62313 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm6P62313 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm6P62313 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm6P62313 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.36■□□□□ 0.69
Lsm6P62313 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm6P62313 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm6P62313 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Lsm6P62313 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm6P62313 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm6P62313 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm6P62313 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lsm6P62313 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lsm6P62313 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm6P62313 Gm16437-201ENSMUST00000025669 507 ntBASIC19.34■□□□□ 0.69
Lsm6P62313 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm6P62313 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lsm6P62313 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm6P62313 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm6P62313 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm6P62313 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Lsm6P62313 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm6P62313 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.33■□□□□ 0.68
Lsm6P62313 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm6P62313 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lsm6P62313 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm6P62313 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm6P62313 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm6P62313 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Lsm6P62313 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm6P62313 Gm11687-201ENSMUST00000118911 886 ntBASIC19.32■□□□□ 0.68
Lsm6P62313 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.32■□□□□ 0.68
Lsm6P62313 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lsm6P62313 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.32■□□□□ 0.68
Lsm6P62313 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm6P62313 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm6P62313 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm6P62313 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm6P62313 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm6P62313 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm6P62313 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm6P62313 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm6P62313 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm6P62313 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lsm6P62313 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm6P62313 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm6P62313 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm6P62313 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.27■□□□□ 0.68
Lsm6P62313 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm6P62313 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm6P62313 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.27■□□□□ 0.68
Lsm6P62313 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm6P62313 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm6P62313 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Lsm6P62313 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm6P62313 Gm22567-201ENSMUST00000175542 342 ntBASIC19.26■□□□□ 0.67
Lsm6P62313 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm6P62313 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm6P62313 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm6P62313 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm6P62313 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.25■□□□□ 0.67
Lsm6P62313 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.25■□□□□ 0.67
Lsm6P62313 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm6P62313 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm6P62313 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.24■□□□□ 0.67
Lsm6P62313 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm6P62313 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm6P62313 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm6P62313 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm6P62313 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm6P62313 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm6P62313 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm6P62313 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm6P62313 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm6P62313 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm6P62313 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm6P62313 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.22■□□□□ 0.67
Lsm6P62313 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm6P62313 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm6P62313 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm6P62313 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm6P62313 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm6P62313 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm6P62313 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lsm6P62313 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lsm6P62313 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm6P62313 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms