Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sssca1P56873 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sssca1P56873 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sssca1P56873 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sssca1P56873 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sssca1P56873 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sssca1P56873 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sssca1P56873 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sssca1P56873 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sssca1P56873 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sssca1P56873 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sssca1P56873 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sssca1P56873 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sssca1P56873 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sssca1P56873 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sssca1P56873 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sssca1P56873 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.76■□□□□ 0.43
Sssca1P56873 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sssca1P56873 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sssca1P56873 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sssca1P56873 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sssca1P56873 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sssca1P56873 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.75■□□□□ 0.43
Sssca1P56873 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sssca1P56873 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sssca1P56873 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sssca1P56873 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.73■□□□□ 0.43
Sssca1P56873 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.73■□□□□ 0.43
Sssca1P56873 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sssca1P56873 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sssca1P56873 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sssca1P56873 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.72■□□□□ 0.43
Sssca1P56873 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.72■□□□□ 0.43
Sssca1P56873 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sssca1P56873 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.71■□□□□ 0.43
Sssca1P56873 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sssca1P56873 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sssca1P56873 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sssca1P56873 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sssca1P56873 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sssca1P56873 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.71■□□□□ 0.43
Sssca1P56873 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sssca1P56873 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.71■□□□□ 0.43
Sssca1P56873 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sssca1P56873 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.7■□□□□ 0.42
Sssca1P56873 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sssca1P56873 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sssca1P56873 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sssca1P56873 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.69■□□□□ 0.42
Sssca1P56873 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sssca1P56873 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sssca1P56873 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sssca1P56873 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sssca1P56873 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sssca1P56873 Gm6821-201ENSMUST00000107540 542 ntBASIC17.68■□□□□ 0.42
Sssca1P56873 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sssca1P56873 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sssca1P56873 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sssca1P56873 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sssca1P56873 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sssca1P56873 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.67■□□□□ 0.42
Sssca1P56873 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.67■□□□□ 0.42
Sssca1P56873 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sssca1P56873 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sssca1P56873 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.66■□□□□ 0.42
Sssca1P56873 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sssca1P56873 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sssca1P56873 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.65■□□□□ 0.42
Sssca1P56873 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sssca1P56873 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms