Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mir3960-201ENSMUST00000198213 73 ntBASIC19.87■□□□□ 0.77
Rfx3P48381 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx3P48381 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rfx3P48381 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx3P48381 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rfx3P48381 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfx3P48381 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx3P48381 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx3P48381 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx3P48381 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
Rfx3P48381 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.85■□□□□ 0.77
Rfx3P48381 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx3P48381 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx3P48381 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx3P48381 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx3P48381 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx3P48381 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rfx3P48381 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx3P48381 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.83■□□□□ 0.77
Rfx3P48381 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.83■□□□□ 0.77
Rfx3P48381 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.83■□□□□ 0.77
Rfx3P48381 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx3P48381 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx3P48381 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rfx3P48381 Gm9812-201ENSMUST00000061934 968 ntBASIC19.82■□□□□ 0.76
Rfx3P48381 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx3P48381 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.82■□□□□ 0.76
Rfx3P48381 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rfx3P48381 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.81■□□□□ 0.76
Rfx3P48381 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.81■□□□□ 0.76
Rfx3P48381 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx3P48381 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx3P48381 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.81■□□□□ 0.76
Rfx3P48381 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rfx3P48381 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx3P48381 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Rfx3P48381 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx3P48381 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx3P48381 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rfx3P48381 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.79■□□□□ 0.76
Rfx3P48381 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rfx3P48381 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx3P48381 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Rfx3P48381 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx3P48381 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.78■□□□□ 0.76
Rfx3P48381 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfx3P48381 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx3P48381 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.77■□□□□ 0.76
Rfx3P48381 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx3P48381 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx3P48381 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.77■□□□□ 0.76
Rfx3P48381 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx3P48381 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rfx3P48381 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 Gm45364-201ENSMUST00000210883 159 ntBASIC19.76■□□□□ 0.75
Rfx3P48381 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.76■□□□□ 0.75
Rfx3P48381 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rfx3P48381 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rfx3P48381 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx3P48381 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx3P48381 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rfx3P48381 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.74■□□□□ 0.75
Rfx3P48381 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx3P48381 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx3P48381 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx3P48381 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx3P48381 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx3P48381 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms