Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.44■□□□□ 0.54
Mmp9P41245 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Mmp9P41245 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Mmp9P41245 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp9P41245 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp9P41245 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.42■□□□□ 0.54
Mmp9P41245 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Mmp9P41245 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mmp9P41245 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Mmp9P41245 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Mmp9P41245 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp9P41245 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp9P41245 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp9P41245 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mmp9P41245 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mmp9P41245 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp9P41245 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp9P41245 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Mmp9P41245 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mmp9P41245 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp9P41245 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp9P41245 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp9P41245 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mmp9P41245 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.39■□□□□ 0.53
Mmp9P41245 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp9P41245 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp9P41245 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mmp9P41245 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp9P41245 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp9P41245 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Mmp9P41245 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp9P41245 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.38■□□□□ 0.53
Mmp9P41245 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mmp9P41245 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp9P41245 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp9P41245 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mmp9P41245 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Mmp9P41245 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp9P41245 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp9P41245 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp9P41245 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp9P41245 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp9P41245 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Mmp9P41245 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp9P41245 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Mmp9P41245 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp9P41245 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp9P41245 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp9P41245 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mmp9P41245 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp9P41245 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp9P41245 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp9P41245 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp9P41245 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mmp9P41245 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.33■□□□□ 0.52
Mmp9P41245 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp9P41245 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Mmp9P41245 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp9P41245 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp9P41245 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Mmp9P41245 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp9P41245 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp9P41245 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Mmp9P41245 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp9P41245 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp9P41245 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp9P41245 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp9P41245 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp9P41245 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp9P41245 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp9P41245 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms