Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn1aP39689 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn1aP39689 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn1aP39689 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdkn1aP39689 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkn1aP39689 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cdkn1aP39689 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn1aP39689 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cdkn1aP39689 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1aP39689 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1aP39689 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.25■□□□□ 0.51
Cdkn1aP39689 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdkn1aP39689 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdkn1aP39689 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1aP39689 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1aP39689 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdkn1aP39689 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdkn1aP39689 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1aP39689 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdkn1aP39689 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1aP39689 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1aP39689 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1aP39689 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1aP39689 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.22■□□□□ 0.51
Cdkn1aP39689 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkn1aP39689 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkn1aP39689 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cdkn1aP39689 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdkn1aP39689 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.21■□□□□ 0.51
Cdkn1aP39689 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkn1aP39689 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkn1aP39689 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkn1aP39689 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkn1aP39689 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkn1aP39689 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkn1aP39689 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdkn1aP39689 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn1aP39689 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn1aP39689 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkn1aP39689 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cdkn1aP39689 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn1aP39689 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn1aP39689 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Gm5812-201ENSMUST00000061073 957 ntBASIC18.16■□□□□ 0.5
Cdkn1aP39689 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkn1aP39689 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdkn1aP39689 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdkn1aP39689 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdkn1aP39689 Gm13238-201ENSMUST00000117655 780 ntBASIC18.14■□□□□ 0.49
Cdkn1aP39689 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdkn1aP39689 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdkn1aP39689 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms