Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp2P33434 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp2P33434 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp2P33434 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Mmp2P33434 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Mmp2P33434 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp2P33434 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mmp2P33434 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp2P33434 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp2P33434 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp2P33434 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp2P33434 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp2P33434 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp2P33434 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Mmp2P33434 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Mmp2P33434 Gm7332-201ENSMUST00000118351 454 ntBASIC20.54■□□□□ 0.88
Mmp2P33434 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.54■□□□□ 0.88
Mmp2P33434 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Mmp2P33434 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp2P33434 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp2P33434 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp2P33434 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp2P33434 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Mmp2P33434 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp2P33434 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp2P33434 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp2P33434 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp2P33434 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp2P33434 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp2P33434 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp2P33434 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.52■□□□□ 0.88
Mmp2P33434 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.52■□□□□ 0.88
Mmp2P33434 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.52■□□□□ 0.88
Mmp2P33434 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.52■□□□□ 0.88
Mmp2P33434 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp2P33434 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp2P33434 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp2P33434 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mmp2P33434 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp2P33434 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Mmp2P33434 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp2P33434 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
Mmp2P33434 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp2P33434 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp2P33434 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp2P33434 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp2P33434 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Mmp2P33434 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp2P33434 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp2P33434 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp2P33434 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Mmp2P33434 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp2P33434 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp2P33434 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp2P33434 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Mmp2P33434 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Mmp2P33434 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp2P33434 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Mmp2P33434 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Mmp2P33434 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Mmp2P33434 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp2P33434 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp2P33434 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp2P33434 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.45■□□□□ 0.86
Mmp2P33434 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp2P33434 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Mmp2P33434 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp2P33434 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Mmp2P33434 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.43■□□□□ 0.86
Mmp2P33434 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Mmp2P33434 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp2P33434 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp2P33434 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp2P33434 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.42■□□□□ 0.86
Mmp2P33434 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.42■□□□□ 0.86
Mmp2P33434 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp2P33434 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.41■□□□□ 0.86
Mmp2P33434 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp2P33434 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp2P33434 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Mmp2P33434 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.41■□□□□ 0.86
Mmp2P33434 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms