Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd40P27512 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd40P27512 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd40P27512 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cd40P27512 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd40P27512 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd40P27512 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd40P27512 Gm14523-201ENSMUST00000117260 558 ntBASIC20.05■□□□□ 0.8
Cd40P27512 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cd40P27512 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Cd40P27512 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd40P27512 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd40P27512 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd40P27512 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.03■□□□□ 0.8
Cd40P27512 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Cd40P27512 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd40P27512 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd40P27512 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd40P27512 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cd40P27512 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.02■□□□□ 0.8
Cd40P27512 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cd40P27512 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cd40P27512 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Cd40P27512 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cd40P27512 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.02■□□□□ 0.79
Cd40P27512 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd40P27512 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cd40P27512 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Gm7332-201ENSMUST00000118351 454 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Gm12366-201ENSMUST00000121722 873 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.01■□□□□ 0.79
Cd40P27512 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd40P27512 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd40P27512 Gm5786-201ENSMUST00000085368 882 ntBASIC20.01■□□□□ 0.79
Cd40P27512 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd40P27512 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cd40P27512 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cd40P27512 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20■□□□□ 0.79
Cd40P27512 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cd40P27512 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20■□□□□ 0.79
Cd40P27512 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd40P27512 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd40P27512 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cd40P27512 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd40P27512 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd40P27512 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd40P27512 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cd40P27512 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd40P27512 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd40P27512 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cd40P27512 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.98■□□□□ 0.79
Cd40P27512 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd40P27512 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cd40P27512 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.98■□□□□ 0.79
Cd40P27512 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cd40P27512 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cd40P27512 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cd40P27512 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cd40P27512 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cd40P27512 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd40P27512 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cd40P27512 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.97■□□□□ 0.79
Cd40P27512 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd40P27512 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.97■□□□□ 0.79
Cd40P27512 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd40P27512 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cd40P27512 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd40P27512 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.96■□□□□ 0.79
Cd40P27512 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cd40P27512 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cd40P27512 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd40P27512 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cd40P27512 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.95■□□□□ 0.78
Cd40P27512 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd40P27512 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd40P27512 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd40P27512 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd40P27512 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd40P27512 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.93■□□□□ 0.78
Cd40P27512 Gm22567-201ENSMUST00000175542 342 ntBASIC19.93■□□□□ 0.78
Cd40P27512 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.92■□□□□ 0.78
Cd40P27512 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms