Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.59■□□□□ 0.57
Col8a2P25318 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.59■□□□□ 0.57
Col8a2P25318 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col8a2P25318 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.58■□□□□ 0.57
Col8a2P25318 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.58■□□□□ 0.56
Col8a2P25318 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col8a2P25318 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.58■□□□□ 0.56
Col8a2P25318 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col8a2P25318 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Col8a2P25318 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.57■□□□□ 0.56
Col8a2P25318 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col8a2P25318 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col8a2P25318 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col8a2P25318 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col8a2P25318 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col8a2P25318 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col8a2P25318 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.56■□□□□ 0.56
Col8a2P25318 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col8a2P25318 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col8a2P25318 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col8a2P25318 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col8a2P25318 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col8a2P25318 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col8a2P25318 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col8a2P25318 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col8a2P25318 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col8a2P25318 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col8a2P25318 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col8a2P25318 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.54■□□□□ 0.56
Col8a2P25318 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col8a2P25318 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col8a2P25318 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col8a2P25318 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col8a2P25318 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Col8a2P25318 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col8a2P25318 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col8a2P25318 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
Col8a2P25318 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col8a2P25318 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col8a2P25318 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.5■□□□□ 0.55
Col8a2P25318 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col8a2P25318 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col8a2P25318 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.5■□□□□ 0.55
Col8a2P25318 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.49■□□□□ 0.55
Col8a2P25318 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col8a2P25318 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col8a2P25318 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col8a2P25318 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.48■□□□□ 0.55
Col8a2P25318 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col8a2P25318 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col8a2P25318 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col8a2P25318 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col8a2P25318 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col8a2P25318 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.47■□□□□ 0.55
Col8a2P25318 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col8a2P25318 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col8a2P25318 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col8a2P25318 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col8a2P25318 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col8a2P25318 Gm13238-201ENSMUST00000117655 780 ntBASIC18.46■□□□□ 0.55
Col8a2P25318 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col8a2P25318 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col8a2P25318 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Col8a2P25318 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col8a2P25318 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Col8a2P25318 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.45■□□□□ 0.54
Col8a2P25318 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.45■□□□□ 0.54
Col8a2P25318 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col8a2P25318 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col8a2P25318 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col8a2P25318 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col8a2P25318 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.43■□□□□ 0.54
Col8a2P25318 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col8a2P25318 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col8a2P25318 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col8a2P25318 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col8a2P25318 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.43■□□□□ 0.54
Col8a2P25318 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.43■□□□□ 0.54
Col8a2P25318 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col8a2P25318 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col8a2P25318 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Col8a2P25318 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col8a2P25318 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms