Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.49■□□□□ 0.71
P20040 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Gm45364-201ENSMUST00000210883 159 ntBASIC19.48■□□□□ 0.71
P20040 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.46■□□□□ 0.71
P20040 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P20040 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
P20040 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
P20040 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
P20040 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
P20040 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
P20040 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Gm11175-201ENSMUST00000116172 543 ntBASIC19.43■□□□□ 0.7
P20040 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Mir6538-201ENSMUST00000183713 110 ntBASIC19.43■□□□□ 0.7
P20040 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
P20040 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.41■□□□□ 0.7
P20040 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.4■□□□□ 0.7
P20040 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Gm9812-201ENSMUST00000061934 968 ntBASIC19.4■□□□□ 0.7
P20040 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
P20040 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.4■□□□□ 0.7
P20040 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.39■□□□□ 0.7
P20040 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P20040 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Scarna2-201ENSMUST00000157560 414 ntBASIC19.39■□□□□ 0.69
P20040 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
P20040 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.39■□□□□ 0.69
P20040 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Gm9806-201ENSMUST00000051080 552 ntBASIC19.38■□□□□ 0.69
P20040 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P20040 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.37■□□□□ 0.69
P20040 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms