Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl3P10855 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ccl3P10855 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl3P10855 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccl3P10855 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl3P10855 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccl3P10855 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl3P10855 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccl3P10855 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccl3P10855 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccl3P10855 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl3P10855 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Etf1-202ENSMUST00000180351 108 ntBASIC19.81■□□□□ 0.76
Ccl3P10855 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccl3P10855 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl3P10855 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccl3P10855 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccl3P10855 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl3P10855 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccl3P10855 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ccl3P10855 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccl3P10855 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccl3P10855 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccl3P10855 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl3P10855 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccl3P10855 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccl3P10855 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccl3P10855 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccl3P10855 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl3P10855 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl3P10855 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ccl3P10855 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl3P10855 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl3P10855 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccl3P10855 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl3P10855 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ccl3P10855 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.72■□□□□ 0.75
Ccl3P10855 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl3P10855 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccl3P10855 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccl3P10855 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
Ccl3P10855 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ccl3P10855 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl3P10855 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccl3P10855 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.7■□□□□ 0.74
Ccl3P10855 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccl3P10855 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.7■□□□□ 0.74
Ccl3P10855 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccl3P10855 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccl3P10855 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccl3P10855 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccl3P10855 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccl3P10855 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl3P10855 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms