Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc1P07903 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.45■□□□□ 0.54
Ercc1P07903 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc1P07903 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc1P07903 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc1P07903 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc1P07903 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc1P07903 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc1P07903 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ercc1P07903 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ercc1P07903 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ercc1P07903 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ercc1P07903 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ercc1P07903 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ercc1P07903 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.43■□□□□ 0.54
Ercc1P07903 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ercc1P07903 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ercc1P07903 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ercc1P07903 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ercc1P07903 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ercc1P07903 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ercc1P07903 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.41■□□□□ 0.54
Ercc1P07903 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Ercc1P07903 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ercc1P07903 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.4■□□□□ 0.54
Ercc1P07903 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ercc1P07903 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ercc1P07903 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.4■□□□□ 0.54
Ercc1P07903 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ercc1P07903 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.39■□□□□ 0.54
Ercc1P07903 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ercc1P07903 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.39■□□□□ 0.53
Ercc1P07903 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.39■□□□□ 0.53
Ercc1P07903 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ercc1P07903 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ercc1P07903 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ercc1P07903 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ercc1P07903 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ercc1P07903 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ercc1P07903 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.38■□□□□ 0.53
Ercc1P07903 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ercc1P07903 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.37■□□□□ 0.53
Ercc1P07903 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc1P07903 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.37■□□□□ 0.53
Ercc1P07903 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc1P07903 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc1P07903 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Ercc1P07903 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc1P07903 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ercc1P07903 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.36■□□□□ 0.53
Ercc1P07903 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc1P07903 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc1P07903 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc1P07903 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.35■□□□□ 0.53
Ercc1P07903 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc1P07903 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.35■□□□□ 0.53
Ercc1P07903 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc1P07903 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc1P07903 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
Ercc1P07903 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc1P07903 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ercc1P07903 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc1P07903 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc1P07903 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ercc1P07903 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc1P07903 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ercc1P07903 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc1P07903 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc1P07903 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc1P07903 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc1P07903 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc1P07903 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ercc1P07903 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ercc1P07903 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc1P07903 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.32■□□□□ 0.52
Ercc1P07903 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc1P07903 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc1P07903 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc1P07903 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc1P07903 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc1P07903 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc1P07903 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ercc1P07903 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ercc1P07903 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms