Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01804 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01804 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
P01804 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
P01804 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P01804 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01804 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
P01804 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01804 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
P01804 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01804 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.06■□□□□ 0.64
P01804 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01804 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01804 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01804 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01804 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.05■□□□□ 0.64
P01804 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01804 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.04■□□□□ 0.64
P01804 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
P01804 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P01804 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
P01804 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01804 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
P01804 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
P01804 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
P01804 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.02■□□□□ 0.64
P01804 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01804 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01804 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01804 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01804 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01804 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01804 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19■□□□□ 0.63
P01804 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01804 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01804 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01804 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01804 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01804 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01804 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
P01804 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01804 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
P01804 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01804 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01804 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01804 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
P01804 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01804 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01804 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P01804 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P01804 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P01804 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01804 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01804 Gm10420-201ENSMUST00000121713 882 ntBASIC18.95■□□□□ 0.62
P01804 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01804 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01804 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.94■□□□□ 0.62
P01804 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
P01804 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01804 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01804 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.93■□□□□ 0.62
P01804 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.93■□□□□ 0.62
P01804 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
P01804 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.92■□□□□ 0.62
P01804 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01804 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.92■□□□□ 0.62
P01804 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01804 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01804 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01804 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P01804 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01804 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01804 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
P01804 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.91■□□□□ 0.62
P01804 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01804 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01804 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01804 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms