Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hcn1O88704 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hcn1O88704 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hcn1O88704 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hcn1O88704 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hcn1O88704 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hcn1O88704 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcn1O88704 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.99■□□□□ 0.95
Hcn1O88704 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcn1O88704 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcn1O88704 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hcn1O88704 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hcn1O88704 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hcn1O88704 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hcn1O88704 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcn1O88704 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.97■□□□□ 0.95
Hcn1O88704 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcn1O88704 Terc-201ENSMUST00000082862 423 ntBASIC20.97■□□□□ 0.95
Hcn1O88704 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcn1O88704 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hcn1O88704 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcn1O88704 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.96■□□□□ 0.95
Hcn1O88704 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn1O88704 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn1O88704 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn1O88704 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.96■□□□□ 0.95
Hcn1O88704 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn1O88704 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn1O88704 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hcn1O88704 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.95■□□□□ 0.94
Hcn1O88704 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn1O88704 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Hcn1O88704 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn1O88704 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.94■□□□□ 0.94
Hcn1O88704 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn1O88704 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.93■□□□□ 0.94
Hcn1O88704 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Hcn1O88704 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn1O88704 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn1O88704 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn1O88704 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hcn1O88704 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn1O88704 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn1O88704 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn1O88704 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hcn1O88704 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn1O88704 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.9■□□□□ 0.94
Hcn1O88704 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn1O88704 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn1O88704 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn1O88704 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn1O88704 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn1O88704 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn1O88704 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.89■□□□□ 0.93
Hcn1O88704 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.88■□□□□ 0.93
Hcn1O88704 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.88■□□□□ 0.93
Hcn1O88704 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hcn1O88704 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn1O88704 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn1O88704 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hcn1O88704 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn1O88704 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn1O88704 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn1O88704 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn1O88704 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms