Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdlim1O70400 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdlim1O70400 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.91■■□□□ 1.1
Pdlim1O70400 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim1O70400 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pdlim1O70400 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pdlim1O70400 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pdlim1O70400 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdlim1O70400 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pdlim1O70400 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdlim1O70400 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdlim1O70400 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pdlim1O70400 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim1O70400 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.88■■□□□ 1.09
Pdlim1O70400 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Pdlim1O70400 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim1O70400 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim1O70400 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.87■■□□□ 1.09
Pdlim1O70400 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim1O70400 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Pdlim1O70400 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim1O70400 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pdlim1O70400 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.86■■□□□ 1.09
Pdlim1O70400 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.86■■□□□ 1.09
Pdlim1O70400 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Pdlim1O70400 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.86■■□□□ 1.09
Pdlim1O70400 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.86■■□□□ 1.09
Pdlim1O70400 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.86■■□□□ 1.09
Pdlim1O70400 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim1O70400 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim1O70400 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim1O70400 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim1O70400 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim1O70400 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim1O70400 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim1O70400 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim1O70400 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim1O70400 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.84■■□□□ 1.09
Pdlim1O70400 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim1O70400 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim1O70400 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdlim1O70400 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim1O70400 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim1O70400 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim1O70400 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim1O70400 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pdlim1O70400 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.82■■□□□ 1.08
Pdlim1O70400 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.82■■□□□ 1.08
Pdlim1O70400 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim1O70400 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pdlim1O70400 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim1O70400 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim1O70400 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim1O70400 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim1O70400 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim1O70400 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
Pdlim1O70400 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim1O70400 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pdlim1O70400 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim1O70400 Gm10420-201ENSMUST00000121713 882 ntBASIC21.79■■□□□ 1.08
Pdlim1O70400 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pdlim1O70400 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim1O70400 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim1O70400 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pdlim1O70400 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim1O70400 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pdlim1O70400 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim1O70400 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.76■■□□□ 1.07
Pdlim1O70400 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.76■■□□□ 1.07
Pdlim1O70400 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.76■■□□□ 1.07
Pdlim1O70400 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim1O70400 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim1O70400 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim1O70400 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim1O70400 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim1O70400 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim1O70400 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim1O70400 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim1O70400 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim1O70400 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim1O70400 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim1O70400 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim1O70400 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Pdlim1O70400 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.73■■□□□ 1.07
Pdlim1O70400 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim1O70400 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim1O70400 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim1O70400 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms