Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Cntnap1O54991 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Cntnap1O54991 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cntnap1O54991 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Cntnap1O54991 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cntnap1O54991 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Cntnap1O54991 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cntnap1O54991 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Cntnap1O54991 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC29.98■■■□□ 2.39
Cntnap1O54991 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
Cntnap1O54991 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC29.97■■■□□ 2.39
Cntnap1O54991 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Cntnap1O54991 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cntnap1O54991 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cntnap1O54991 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Cntnap1O54991 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cntnap1O54991 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cntnap1O54991 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cntnap1O54991 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cntnap1O54991 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cntnap1O54991 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Cntnap1O54991 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Cntnap1O54991 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cntnap1O54991 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
Cntnap1O54991 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Cntnap1O54991 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Cntnap1O54991 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Cntnap1O54991 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC29.9■■■□□ 2.38
Cntnap1O54991 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Cntnap1O54991 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Cntnap1O54991 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Cntnap1O54991 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Cntnap1O54991 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Cntnap1O54991 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.37
Cntnap1O54991 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Cntnap1O54991 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC29.88■■■□□ 2.37
Cntnap1O54991 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Cntnap1O54991 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cntnap1O54991 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Cntnap1O54991 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC29.87■■■□□ 2.37
Cntnap1O54991 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Cntnap1O54991 Gm40881-201ENSMUST00000223397 166 ntBASIC29.87■■■□□ 2.37
Cntnap1O54991 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cntnap1O54991 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC29.87■■■□□ 2.37
Cntnap1O54991 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Cntnap1O54991 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cntnap1O54991 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC29.86■■■□□ 2.37
Cntnap1O54991 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC29.86■■■□□ 2.37
Cntnap1O54991 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC29.86■■■□□ 2.37
Cntnap1O54991 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cntnap1O54991 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Cntnap1O54991 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC29.85■■■□□ 2.37
Cntnap1O54991 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC29.85■■■□□ 2.37
Cntnap1O54991 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
Cntnap1O54991 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cntnap1O54991 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
Cntnap1O54991 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC29.83■■■□□ 2.37
Cntnap1O54991 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Cntnap1O54991 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC29.83■■■□□ 2.37
Cntnap1O54991 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cntnap1O54991 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cntnap1O54991 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC29.82■■■□□ 2.36
Cntnap1O54991 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC29.82■■■□□ 2.36
Cntnap1O54991 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Cntnap1O54991 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Cntnap1O54991 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cntnap1O54991 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cntnap1O54991 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cntnap1O54991 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cntnap1O54991 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC29.8■■■□□ 2.36
Cntnap1O54991 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC29.8■■■□□ 2.36
Cntnap1O54991 AC164629.5-201ENSMUST00000220387 632 ntBASIC29.8■■■□□ 2.36
Cntnap1O54991 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC29.8■■■□□ 2.36
Cntnap1O54991 Spcs1-207ENSMUST00000228767 1008 ntBASIC29.8■■■□□ 2.36
Cntnap1O54991 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cntnap1O54991 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cntnap1O54991 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Cntnap1O54991 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cntnap1O54991 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC29.78■■■□□ 2.36
Cntnap1O54991 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Cntnap1O54991 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.78■■■□□ 2.36
Cntnap1O54991 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Cntnap1O54991 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC29.77■■■□□ 2.36
Cntnap1O54991 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cntnap1O54991 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cntnap1O54991 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Cntnap1O54991 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cntnap1O54991 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cntnap1O54991 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cntnap1O54991 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cntnap1O54991 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC29.75■■■□□ 2.35
Cntnap1O54991 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cntnap1O54991 Gm4419-202ENSMUST00000226239 1431 ntBASIC29.74■■■□□ 2.35
Cntnap1O54991 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Cntnap1O54991 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Cntnap1O54991 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
Cntnap1O54991 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cntnap1O54991 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cntnap1O54991 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC29.73■■■□□ 2.35
Cntnap1O54991 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms