Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.66■■□□□ 1.38
Kcnu1O54982 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Kcnu1O54982 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.66■■□□□ 1.38
Kcnu1O54982 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Kcnu1O54982 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Kcnu1O54982 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Kcnu1O54982 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.65■■□□□ 1.38
Kcnu1O54982 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Kcnu1O54982 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Kcnu1O54982 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Kcnu1O54982 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Kcnu1O54982 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Kcnu1O54982 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Kcnu1O54982 Gm6311-201ENSMUST00000073790 878 ntBASIC23.63■■□□□ 1.37
Kcnu1O54982 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Kcnu1O54982 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Kcnu1O54982 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.62■■□□□ 1.37
Kcnu1O54982 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Kcnu1O54982 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnu1O54982 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Kcnu1O54982 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnu1O54982 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnu1O54982 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnu1O54982 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.61■■□□□ 1.37
Kcnu1O54982 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Kcnu1O54982 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnu1O54982 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnu1O54982 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnu1O54982 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.6■■□□□ 1.37
Kcnu1O54982 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnu1O54982 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnu1O54982 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Kcnu1O54982 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnu1O54982 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnu1O54982 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnu1O54982 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnu1O54982 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnu1O54982 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kcnu1O54982 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kcnu1O54982 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Kcnu1O54982 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kcnu1O54982 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.58■■□□□ 1.36
Kcnu1O54982 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Kcnu1O54982 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Kcnu1O54982 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.57■■□□□ 1.36
Kcnu1O54982 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Kcnu1O54982 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.57■■□□□ 1.36
Kcnu1O54982 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.56■■□□□ 1.36
Kcnu1O54982 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.56■■□□□ 1.36
Kcnu1O54982 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Kcnu1O54982 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Kcnu1O54982 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Kcnu1O54982 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Kcnu1O54982 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnu1O54982 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnu1O54982 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kcnu1O54982 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Kcnu1O54982 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Kcnu1O54982 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Kcnu1O54982 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Kcnu1O54982 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Kcnu1O54982 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.53■■□□□ 1.36
Kcnu1O54982 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Kcnu1O54982 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Kcnu1O54982 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.53■■□□□ 1.36
Kcnu1O54982 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kcnu1O54982 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kcnu1O54982 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.52■■□□□ 1.36
Kcnu1O54982 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Kcnu1O54982 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Kcnu1O54982 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kcnu1O54982 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Kcnu1O54982 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Kcnu1O54982 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kcnu1O54982 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kcnu1O54982 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kcnu1O54982 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.5■■□□□ 1.35
Kcnu1O54982 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.49■■□□□ 1.35
Kcnu1O54982 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnu1O54982 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnu1O54982 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnu1O54982 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
Kcnu1O54982 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.49■■□□□ 1.35
Kcnu1O54982 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnu1O54982 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Kcnu1O54982 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kcnu1O54982 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Kcnu1O54982 Scarna2-201ENSMUST00000157560 414 ntBASIC23.48■■□□□ 1.35
Kcnu1O54982 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.48■■□□□ 1.35
Kcnu1O54982 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Kcnu1O54982 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.47■■□□□ 1.35
Kcnu1O54982 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.47■■□□□ 1.35
Kcnu1O54982 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Kcnu1O54982 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Kcnu1O54982 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms