Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lsm2O35900 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm2O35900 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm2O35900 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm2O35900 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.76■□□□□ 0.75
Lsm2O35900 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.76■□□□□ 0.75
Lsm2O35900 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm2O35900 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
Lsm2O35900 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm2O35900 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm2O35900 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm2O35900 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm2O35900 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Lsm2O35900 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm2O35900 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lsm2O35900 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm2O35900 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Lsm2O35900 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm2O35900 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm2O35900 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm2O35900 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm2O35900 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm2O35900 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lsm2O35900 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm2O35900 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm2O35900 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm2O35900 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Lsm2O35900 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Lsm2O35900 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Lsm2O35900 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm2O35900 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lsm2O35900 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Lsm2O35900 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm2O35900 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 Gm45855-201ENSMUST00000212546 880 ntBASIC19.71■□□□□ 0.75
Lsm2O35900 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsm2O35900 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Lsm2O35900 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsm2O35900 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.71■□□□□ 0.75
Lsm2O35900 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm2O35900 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm2O35900 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm2O35900 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Lsm2O35900 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm2O35900 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lsm2O35900 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsm2O35900 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.7■□□□□ 0.74
Lsm2O35900 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
Lsm2O35900 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm2O35900 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsm2O35900 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Lsm2O35900 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm2O35900 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm2O35900 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm2O35900 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.68■□□□□ 0.74
Lsm2O35900 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.68■□□□□ 0.74
Lsm2O35900 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm2O35900 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm2O35900 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm2O35900 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm2O35900 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm2O35900 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lsm2O35900 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Lsm2O35900 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.66■□□□□ 0.74
Lsm2O35900 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm2O35900 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm2O35900 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.65■□□□□ 0.74
Lsm2O35900 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm2O35900 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm2O35900 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.65■□□□□ 0.74
Lsm2O35900 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm2O35900 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm2O35900 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Lsm2O35900 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm2O35900 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm2O35900 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm2O35900 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm2O35900 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lsm2O35900 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.62■□□□□ 0.73
Lsm2O35900 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.62■□□□□ 0.73
Lsm2O35900 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm2O35900 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.61■□□□□ 0.73
Lsm2O35900 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.61■□□□□ 0.73
Lsm2O35900 Gm22567-201ENSMUST00000175542 342 ntBASIC19.61■□□□□ 0.73
Lsm2O35900 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm2O35900 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm2O35900 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm2O35900 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm2O35900 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm2O35900 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lsm2O35900 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms