Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.73■■□□□ 1.23
Ptch2O35595 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch2O35595 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ptch2O35595 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch2O35595 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch2O35595 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Ptch2O35595 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ptch2O35595 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Ptch2O35595 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch2O35595 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.7■■□□□ 1.22
Ptch2O35595 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.7■■□□□ 1.22
Ptch2O35595 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch2O35595 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch2O35595 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.7■■□□□ 1.22
Ptch2O35595 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch2O35595 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch2O35595 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.69■■□□□ 1.22
Ptch2O35595 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ptch2O35595 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptch2O35595 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.69■■□□□ 1.22
Ptch2O35595 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Ptch2O35595 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Ptch2O35595 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.68■■□□□ 1.22
Ptch2O35595 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch2O35595 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Ptch2O35595 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.68■■□□□ 1.22
Ptch2O35595 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch2O35595 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptch2O35595 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ptch2O35595 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch2O35595 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch2O35595 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch2O35595 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.66■■□□□ 1.22
Ptch2O35595 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptch2O35595 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch2O35595 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch2O35595 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.65■■□□□ 1.22
Ptch2O35595 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ptch2O35595 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptch2O35595 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptch2O35595 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptch2O35595 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptch2O35595 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch2O35595 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ptch2O35595 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.63■■□□□ 1.21
Ptch2O35595 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.63■■□□□ 1.21
Ptch2O35595 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptch2O35595 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch2O35595 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch2O35595 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptch2O35595 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptch2O35595 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.61■■□□□ 1.21
Ptch2O35595 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.6■■□□□ 1.21
Ptch2O35595 Rps24-207ENSMUST00000224568 714 ntBASIC22.6■■□□□ 1.21
Ptch2O35595 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch2O35595 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptch2O35595 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch2O35595 Gm14117-201ENSMUST00000122417 843 ntBASIC22.59■■□□□ 1.21
Ptch2O35595 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch2O35595 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch2O35595 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch2O35595 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ptch2O35595 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.58■■□□□ 1.21
Ptch2O35595 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Ptch2O35595 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch2O35595 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.58■■□□□ 1.21
Ptch2O35595 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ptch2O35595 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ptch2O35595 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ptch2O35595 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Ptch2O35595 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch2O35595 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.56■■□□□ 1.2
Ptch2O35595 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch2O35595 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms