Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk4O35493 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk4O35493 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clk4O35493 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Clk4O35493 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk4O35493 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.05■□□□□ 0.96
Clk4O35493 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk4O35493 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clk4O35493 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk4O35493 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk4O35493 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk4O35493 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk4O35493 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clk4O35493 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.03■□□□□ 0.96
Clk4O35493 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.03■□□□□ 0.96
Clk4O35493 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk4O35493 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk4O35493 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk4O35493 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk4O35493 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clk4O35493 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.01■□□□□ 0.95
Clk4O35493 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
Clk4O35493 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk4O35493 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk4O35493 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk4O35493 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21■□□□□ 0.95
Clk4O35493 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk4O35493 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk4O35493 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.99■□□□□ 0.95
Clk4O35493 Gm12366-201ENSMUST00000121722 873 ntBASIC20.99■□□□□ 0.95
Clk4O35493 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk4O35493 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk4O35493 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.99■□□□□ 0.95
Clk4O35493 Gm5786-201ENSMUST00000085368 882 ntBASIC20.99■□□□□ 0.95
Clk4O35493 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk4O35493 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.99■□□□□ 0.95
Clk4O35493 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.99■□□□□ 0.95
Clk4O35493 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk4O35493 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Clk4O35493 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.98■□□□□ 0.95
Clk4O35493 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clk4O35493 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Clk4O35493 Gm14523-201ENSMUST00000117260 558 ntBASIC20.98■□□□□ 0.95
Clk4O35493 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.98■□□□□ 0.95
Clk4O35493 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.98■□□□□ 0.95
Clk4O35493 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.98■□□□□ 0.95
Clk4O35493 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk4O35493 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk4O35493 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk4O35493 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.97■□□□□ 0.95
Clk4O35493 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Clk4O35493 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk4O35493 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk4O35493 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clk4O35493 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Clk4O35493 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clk4O35493 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk4O35493 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk4O35493 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk4O35493 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Clk4O35493 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.94■□□□□ 0.94
Clk4O35493 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk4O35493 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Clk4O35493 Cap2-205ENSMUST00000225824 1634 ntBASIC20.93■□□□□ 0.94
Clk4O35493 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.93■□□□□ 0.94
Clk4O35493 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Clk4O35493 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk4O35493 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Clk4O35493 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms