Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.09■□□□□ 0.65
Gfra3O35118 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfra3O35118 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gfra3O35118 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gfra3O35118 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gfra3O35118 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gfra3O35118 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.07■□□□□ 0.64
Gfra3O35118 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.07■□□□□ 0.64
Gfra3O35118 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfra3O35118 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfra3O35118 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfra3O35118 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gfra3O35118 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gfra3O35118 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gfra3O35118 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gfra3O35118 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gfra3O35118 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gfra3O35118 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gfra3O35118 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gfra3O35118 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Gfra3O35118 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gfra3O35118 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gfra3O35118 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gfra3O35118 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gfra3O35118 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.05■□□□□ 0.64
Gfra3O35118 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gfra3O35118 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.04■□□□□ 0.64
Gfra3O35118 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gfra3O35118 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.04■□□□□ 0.64
Gfra3O35118 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gfra3O35118 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Gfra3O35118 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gfra3O35118 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Gfra3O35118 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gfra3O35118 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gfra3O35118 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gfra3O35118 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gfra3O35118 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gfra3O35118 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gfra3O35118 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.02■□□□□ 0.64
Gfra3O35118 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gfra3O35118 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.01■□□□□ 0.63
Gfra3O35118 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gfra3O35118 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Gfra3O35118 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Gm5921-201ENSMUST00000075898 882 ntBASIC19■□□□□ 0.63
Gfra3O35118 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gfra3O35118 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19■□□□□ 0.63
Gfra3O35118 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gfra3O35118 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gfra3O35118 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gfra3O35118 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gfra3O35118 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gfra3O35118 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Gfra3O35118 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gfra3O35118 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gfra3O35118 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gfra3O35118 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gfra3O35118 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Gfra3O35118 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.97■□□□□ 0.63
Gfra3O35118 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gfra3O35118 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gfra3O35118 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gfra3O35118 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gfra3O35118 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.96■□□□□ 0.63
Gfra3O35118 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.95■□□□□ 0.62
Gfra3O35118 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gfra3O35118 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gfra3O35118 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gfra3O35118 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gfra3O35118 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gfra3O35118 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gfra3O35118 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gfra3O35118 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.94■□□□□ 0.62
Gfra3O35118 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gfra3O35118 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gfra3O35118 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms