Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh1F7BJK1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdh1F7BJK1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh1F7BJK1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdh1F7BJK1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh1F7BJK1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdh1F7BJK1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh1F7BJK1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh1F7BJK1 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.86■□□□□ 0.77
Pcdh1F7BJK1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh1F7BJK1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.85■□□□□ 0.77
Pcdh1F7BJK1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh1F7BJK1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh1F7BJK1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh1F7BJK1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh1F7BJK1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh1F7BJK1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh1F7BJK1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdh1F7BJK1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh1F7BJK1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh1F7BJK1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh1F7BJK1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh1F7BJK1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh1F7BJK1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Gm8503-201ENSMUST00000118131 455 ntBASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh1F7BJK1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh1F7BJK1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh1F7BJK1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh1F7BJK1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdh1F7BJK1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.79■□□□□ 0.76
Pcdh1F7BJK1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh1F7BJK1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh1F7BJK1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh1F7BJK1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh1F7BJK1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdh1F7BJK1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh1F7BJK1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.77■□□□□ 0.76
Pcdh1F7BJK1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh1F7BJK1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh1F7BJK1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.75■□□□□ 0.75
Pcdh1F7BJK1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh1F7BJK1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh1F7BJK1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh1F7BJK1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh1F7BJK1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh1F7BJK1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh1F7BJK1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh1F7BJK1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh1F7BJK1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms