Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Scaf11E9PZM7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Scaf11E9PZM7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Scaf11E9PZM7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Scaf11E9PZM7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Scaf11E9PZM7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Scaf11E9PZM7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC31.83■■■□□ 2.69
Scaf11E9PZM7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Scaf11E9PZM7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC31.82■■■□□ 2.68
Scaf11E9PZM7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Scaf11E9PZM7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Scaf11E9PZM7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Scaf11E9PZM7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Scaf11E9PZM7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Scaf11E9PZM7 Gm7417-201ENSMUST00000192950 473 ntBASIC31.79■■■□□ 2.68
Scaf11E9PZM7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Scaf11E9PZM7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Scaf11E9PZM7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Scaf11E9PZM7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
Scaf11E9PZM7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.78■■■□□ 2.68
Scaf11E9PZM7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Scaf11E9PZM7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Scaf11E9PZM7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.76■■■□□ 2.67
Scaf11E9PZM7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Scaf11E9PZM7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Scaf11E9PZM7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Scaf11E9PZM7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Scaf11E9PZM7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC31.75■■■□□ 2.67
Scaf11E9PZM7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.75■■■□□ 2.67
Scaf11E9PZM7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Scaf11E9PZM7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Scaf11E9PZM7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Scaf11E9PZM7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Scaf11E9PZM7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Scaf11E9PZM7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Scaf11E9PZM7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Scaf11E9PZM7 Gm22238-201ENSMUST00000175222 88 ntBASIC31.72■■■□□ 2.67
Scaf11E9PZM7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Scaf11E9PZM7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.71■■■□□ 2.67
Scaf11E9PZM7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Scaf11E9PZM7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Scaf11E9PZM7 Gm16464-201ENSMUST00000117815 1095 ntBASIC31.7■■■□□ 2.66
Scaf11E9PZM7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.68■■■□□ 2.66
Scaf11E9PZM7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Scaf11E9PZM7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.68■■■□□ 2.66
Scaf11E9PZM7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scaf11E9PZM7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Scaf11E9PZM7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC31.67■■■□□ 2.66
Scaf11E9PZM7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Scaf11E9PZM7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Scaf11E9PZM7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
Scaf11E9PZM7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Scaf11E9PZM7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scaf11E9PZM7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Scaf11E9PZM7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Scaf11E9PZM7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Scaf11E9PZM7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Scaf11E9PZM7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Scaf11E9PZM7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.63■■■□□ 2.65
Scaf11E9PZM7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Scaf11E9PZM7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Scaf11E9PZM7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Scaf11E9PZM7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Scaf11E9PZM7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scaf11E9PZM7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Scaf11E9PZM7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Scaf11E9PZM7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Scaf11E9PZM7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Scaf11E9PZM7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Scaf11E9PZM7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.56■■■□□ 2.64
Scaf11E9PZM7 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.56■■■□□ 2.64
Scaf11E9PZM7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC31.56■■■□□ 2.64
Scaf11E9PZM7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC31.55■■■□□ 2.64
Scaf11E9PZM7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Scaf11E9PZM7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Scaf11E9PZM7 Gm12922-201ENSMUST00000120626 809 ntBASIC31.53■■■□□ 2.64
Scaf11E9PZM7 Gm27454-201ENSMUST00000185090 204 ntBASIC31.53■■■□□ 2.64
Scaf11E9PZM7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scaf11E9PZM7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Scaf11E9PZM7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Scaf11E9PZM7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.52■■■□□ 2.64
Scaf11E9PZM7 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.52■■■□□ 2.64
Scaf11E9PZM7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Scaf11E9PZM7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Scaf11E9PZM7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.51■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms