Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 144.4 ms