Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.29□□□□□ -0.44
Ubr4A2AN08 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubr4A2AN08 Gm10849-201ENSMUST00000100397 618 ntBASIC12.29□□□□□ -0.44
Ubr4A2AN08 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubr4A2AN08 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubr4A2AN08 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubr4A2AN08 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Gm5874-201ENSMUST00000096101 508 ntBASIC12.28□□□□□ -0.44
Ubr4A2AN08 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubr4A2AN08 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.27□□□□□ -0.44
Ubr4A2AN08 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubr4A2AN08 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ubr4A2AN08 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.27□□□□□ -0.44
Ubr4A2AN08 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubr4A2AN08 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.27□□□□□ -0.44
Ubr4A2AN08 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.27□□□□□ -0.44
Ubr4A2AN08 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubr4A2AN08 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubr4A2AN08 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubr4A2AN08 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubr4A2AN08 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubr4A2AN08 Gm2415-204ENSMUST00000190235 2004 ntBASIC12.25□□□□□ -0.45
Ubr4A2AN08 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubr4A2AN08 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubr4A2AN08 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubr4A2AN08 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubr4A2AN08 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.23□□□□□ -0.45
Ubr4A2AN08 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Gm44428-201ENSMUST00000204474 874 ntBASIC12.23□□□□□ -0.45
Ubr4A2AN08 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubr4A2AN08 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubr4A2AN08 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubr4A2AN08 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubr4A2AN08 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubr4A2AN08 Mir7071-201ENSMUST00000184847 69 ntBASIC12.22□□□□□ -0.45
Ubr4A2AN08 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.21□□□□□ -0.45
Ubr4A2AN08 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubr4A2AN08 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubr4A2AN08 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.21□□□□□ -0.46
Ubr4A2AN08 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubr4A2AN08 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.21□□□□□ -0.46
Ubr4A2AN08 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ubr4A2AN08 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Gm37179-201ENSMUST00000194862 823 ntBASIC12.2□□□□□ -0.46
Ubr4A2AN08 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Gm14121-201ENSMUST00000121441 1380 ntBASIC12.2□□□□□ -0.46
Ubr4A2AN08 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.2□□□□□ -0.46
Ubr4A2AN08 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubr4A2AN08 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ubr4A2AN08 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.19□□□□□ -0.46
Ubr4A2AN08 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr4A2AN08 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr4A2AN08 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr4A2AN08 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ubr4A2AN08 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr4A2AN08 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms