Protein–RNA interactions for Protein: A0A1L1SR47

Slc6a16, Solute carrier family 6, member 16, mousemouse

Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a16A0A1L1SR47 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a16A0A1L1SR47 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a16A0A1L1SR47 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a16A0A1L1SR47 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a16A0A1L1SR47 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a16A0A1L1SR47 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a16A0A1L1SR47 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.28■■□□□ 1.48
Slc6a16A0A1L1SR47 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Slc6a16A0A1L1SR47 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
Slc6a16A0A1L1SR47 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Slc6a16A0A1L1SR47 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Slc6a16A0A1L1SR47 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Slc6a16A0A1L1SR47 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a16A0A1L1SR47 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a16A0A1L1SR47 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a16A0A1L1SR47 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a16A0A1L1SR47 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a16A0A1L1SR47 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a16A0A1L1SR47 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a16A0A1L1SR47 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.22■■□□□ 1.47
Slc6a16A0A1L1SR47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a16A0A1L1SR47 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Slc6a16A0A1L1SR47 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a16A0A1L1SR47 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a16A0A1L1SR47 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a16A0A1L1SR47 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.19■■□□□ 1.46
Slc6a16A0A1L1SR47 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.19■■□□□ 1.46
Slc6a16A0A1L1SR47 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Slc6a16A0A1L1SR47 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.18■■□□□ 1.46
Slc6a16A0A1L1SR47 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.18■■□□□ 1.46
Slc6a16A0A1L1SR47 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Slc6a16A0A1L1SR47 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Slc6a16A0A1L1SR47 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.17■■□□□ 1.46
Slc6a16A0A1L1SR47 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.17■■□□□ 1.46
Slc6a16A0A1L1SR47 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a16A0A1L1SR47 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a16A0A1L1SR47 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a16A0A1L1SR47 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a16A0A1L1SR47 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a16A0A1L1SR47 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a16A0A1L1SR47 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.15■■□□□ 1.46
Slc6a16A0A1L1SR47 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a16A0A1L1SR47 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Slc6a16A0A1L1SR47 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.14■■□□□ 1.46
Slc6a16A0A1L1SR47 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Slc6a16A0A1L1SR47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Slc6a16A0A1L1SR47 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a16A0A1L1SR47 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a16A0A1L1SR47 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a16A0A1L1SR47 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a16A0A1L1SR47 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a16A0A1L1SR47 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.13■■□□□ 1.45
Slc6a16A0A1L1SR47 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms