Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.89■■□□□ 1.1
Gm28729A0A1B0GSW2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm28729A0A1B0GSW2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28729A0A1B0GSW2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28729A0A1B0GSW2 Rps24-207ENSMUST00000224568 714 ntBASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm14117-201ENSMUST00000122417 843 ntBASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm45102-201ENSMUST00000207427 857 ntBASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm9959-201ENSMUST00000068277 390 ntBASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Gm28729A0A1B0GSW2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Gm28729A0A1B0GSW2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.76■■□□□ 1.07
Gm28729A0A1B0GSW2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28729A0A1B0GSW2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Gm28729A0A1B0GSW2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28729A0A1B0GSW2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms