Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.61□□□□□ -0.07
Trav13n-2A0A0G2JF93 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-2A0A0G2JF93 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-2A0A0G2JF93 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.58□□□□□ -0.07
Trav13n-2A0A0G2JF93 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav13n-2A0A0G2JF93 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13n-2A0A0G2JF93 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13n-2A0A0G2JF93 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-2A0A0G2JF93 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13n-2A0A0G2JF93 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav13n-2A0A0G2JF93 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-2A0A0G2JF93 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13n-2A0A0G2JF93 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-2A0A0G2JF93 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-2A0A0G2JF93 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Gm30023-201ENSMUST00000197970 889 ntBASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13n-2A0A0G2JF93 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-2A0A0G2JF93 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-2A0A0G2JF93 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13n-2A0A0G2JF93 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-2A0A0G2JF93 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-2A0A0G2JF93 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-2A0A0G2JF93 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-2A0A0G2JF93 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-2A0A0G2JF93 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-2A0A0G2JF93 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-2A0A0G2JF93 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-2A0A0G2JF93 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-2A0A0G2JF93 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13n-2A0A0G2JF93 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-2A0A0G2JF93 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms