Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Scarna2-201ENSMUST00000157560 414 ntBASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav9n-2A0A0G2JDP3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gm16437-201ENSMUST00000025669 507 ntBASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gm9806-201ENSMUST00000051080 552 ntBASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9n-2A0A0G2JDP3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Gm11687-201ENSMUST00000118911 886 ntBASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav9n-2A0A0G2JDP3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav9n-2A0A0G2JDP3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms