Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv20A0A0B4J1H5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv20A0A0B4J1H5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.83■□□□□ 0.77
Trbv20A0A0B4J1H5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.83■□□□□ 0.77
Trbv20A0A0B4J1H5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbv20A0A0B4J1H5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.83■□□□□ 0.76
Trbv20A0A0B4J1H5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv20A0A0B4J1H5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv20A0A0B4J1H5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv20A0A0B4J1H5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.81■□□□□ 0.76
Trbv20A0A0B4J1H5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv20A0A0B4J1H5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trbv20A0A0B4J1H5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv20A0A0B4J1H5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv20A0A0B4J1H5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv20A0A0B4J1H5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv20A0A0B4J1H5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv20A0A0B4J1H5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv20A0A0B4J1H5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.78■□□□□ 0.76
Trbv20A0A0B4J1H5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv20A0A0B4J1H5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv20A0A0B4J1H5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv20A0A0B4J1H5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv20A0A0B4J1H5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv20A0A0B4J1H5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv20A0A0B4J1H5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trbv20A0A0B4J1H5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
Trbv20A0A0B4J1H5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Gm37136-201ENSMUST00000194368 194 ntBASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv20A0A0B4J1H5 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.74■□□□□ 0.75
Trbv20A0A0B4J1H5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trbv20A0A0B4J1H5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trbv20A0A0B4J1H5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Trbv20A0A0B4J1H5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv20A0A0B4J1H5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv20A0A0B4J1H5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv20A0A0B4J1H5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv20A0A0B4J1H5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.71■□□□□ 0.75
Trbv20A0A0B4J1H5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv20A0A0B4J1H5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv20A0A0B4J1H5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.71■□□□□ 0.75
Trbv20A0A0B4J1H5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv20A0A0B4J1H5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.7■□□□□ 0.74
Trbv20A0A0B4J1H5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv20A0A0B4J1H5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv20A0A0B4J1H5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trbv20A0A0B4J1H5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Trbv20A0A0B4J1H5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv20A0A0B4J1H5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Trbv20A0A0B4J1H5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv20A0A0B4J1H5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv20A0A0B4J1H5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv20A0A0B4J1H5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Trbv20A0A0B4J1H5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms