Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv13-3A0A0B4J1H2 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.27■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trbv13-3A0A0B4J1H2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv13-3A0A0B4J1H2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-3A0A0B4J1H2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gm22567-201ENSMUST00000175542 342 ntBASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv13-3A0A0B4J1H2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms